Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00216 ATGCCAGCTGATAATTCAATTCCATTTGACCGAGATGCCGAGCCTTTTGTTGAGGTCGATCCAACTGGAAGGTTTGGACGATACGATGTTCTTCTTGGGTCTGGAGCAGTGAAGAAAGTTTATCGGGCATTTGATCAGGAGGAAGGTATAGAGGTTGCTTGGAATCAGGTTCGATTGAGGAAATTCAGTGGGGATCCAGTGTTCATCAACCGCTTGAGATCGGAGGTTCAGCTGCTGAGCACGTTGAGTAACGATTATATCATAGTTTGCTACAGTGTTTGGAATGATGATGAGCACAATACGTTGAATTTCATTACCGAGGTGTGTACATCAGGAAATCTGAGGGATTATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAGAAGTGGTCAAAGCAGGTACTTGAGGGATTGGATTATCTTCATAATCATGAGCCTTGCATTATTCACCGAGATCTCAACTGCAGTAACATATTTGTCAATGGGAATATTGGTCAGGTGAAAATAGGTGATCTAGGTTTTGCAGCTATAGTTGGCAAGAGTCATGCTGCGCACTCAATCATAGGCACACCGGAGTATATGGCACCAGAACTATACGAGGAAGATTACACAGAGATGGTGGATATATACTCTTTTGCGATGTGTTTGCTTGAGATGGTCACGATGGAGATACCATACAGTGAATGTGATAGTATTGCCAAGATATACAAGAAGGTGACGACTGGAATAAAACCCCAAGCATTAAACAAAGTGACAAATGATGAAGTTAGGGCTTTCATTGAGAAGTGCATTGCACAACCAAGGGCAAGGCCTACCACTTCTGAACTTCTCAAGGACCCCTTCTTCGACGAAGTCAGGGATGAAGATTCCGAACAGAGTTATTAG 891 42.99 MPADNSIPFDRDAEPFVEVDPTGRFGRYDVLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRKFSGDPVFINRLRSEVQLLSTLSNDYIIVCYSVWNDDEHNTLNFITEVCTSGNLRDYRKKHRHVSIKALKKWSKQVLEGLDYLHNHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGFAAIVGKSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTMEIPYSECDSIAKIYKKVTTGIKPQALNKVTNDEVRAFIEKCIAQPRARPTTSELLKDPFFDEVRDEDSEQSY 296
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 961119 964126 - CmaCh02G002160.1 Cma02g00216 287967
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00216 296 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00216 296 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 1 288 - -
Cma02g00216 296 Pfam Protein kinase domain 31 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00216 296 SUPERFAMILY Protein kinase-like (PK-like) 19 285 IPR011009 -
Cma02g00216 296 Gene3D Phosphorylase Kinase; domain 1 11 107 - -
Cma02g00216 296 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 288 - -
Cma02g00216 296 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cma02g00216 Cma19g00871 CCT
Cma02g00216 Cma19g00871 ECH
Cma02g00216 Cma20g00669 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00216 Cma-Chr2:961119 Cma06g00855 Cma-Chr6:4765519 2.12E-163 dispersed
Cma02g00216 Cma-Chr2:961119 Cma20g00669 Cma-Chr20:3066602 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68317 PF00069 Pkinase 1.10E-50 CL0016 Cma PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00216 K08867 - csv:101222153 577.015