Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g00269 | ATGGGAGCTTCCATTGACGTGTTAATTGCTATGTGGAGATTTTGGAGGGTTGTTTGGTCGAACCGACATGTCCACAAAGGTTCAGATGCTGGTGGGCGACAGGATGGTCTCCTATGGTACAAGGATAGTGGACAGCATGCGAATGGTGAGTTTTCAATGGCTGTCGTTCAAGCTAACAATTTACTTGAAGATCAAAGCCAGATTGAGTCAGGCAATTTGAGCTTGCACGAGTCTGGGCCATATGGTACCTTTGTTGGAGTGTATGATGGGCATGGAGGGCCCGAGACGTCGCGCTATGTTAACGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCAGTGGATGTCATAAGAAAGGCCTTTCAAGCTACAGAAGACGGGGTCGTTGCTCAAGTTTCGAAACAATGGTCGATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTTGGTGTAATTTGTGGTGGAACCCTCTACATTGCTAACCTTGGTGATTCACGAGCTGTTTTAGGGAGAGTTGTGAAGGCAACAGGGGAAGTTTTGTCCGTTCAGTTGTCGGCCGAGCATAATGCATCTATAGAGTCTGTTCGGCACGAGCTACGTGCTCTGCATCCTGATGACCCCCAGATTGTAGTTTTGAAGCATAATGTATGGCGCGTGAAGGGCCTTATACAGGTTTCTCGATCGATCGGCGATGTCTATTTGAAGAAAGCTGAATTCAACCAAGAGCCTCTTTATGCCAAGTTTCGCCTTCGTGAACCGATCACAAAGCCGATACTGAGTGCCGAACCATCTATTTCGGTGCTCCAGTTACAGCCACAAGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAACCAGGAAGCTGTGGATATTGTCCAAAACCATCCACGTAGTGGAAGTGCAAGGAGGCTGGTGAAAGCAGCACTGCTAGAGGCAGCAAAGAAGAGAGAAATGAGATACTCTGACTTGAAGAAGATCGACCGTGGCGTACGGCGACATTTCCACGATGACATTACAGTGATTGTTGTGTTTCTCGACTCAAACCTCGTGAGCCGAGGTAGCTCTACAAAATGTGCAAGCCTATCCATACGAGGGGGCGGAGTTAACTTGCGTCCAAACTCATTGGCCCCGTGCACCACGCCATCAGACCACAGCATGGCCTGA | 1203 | 47.96 | MGASIDVLIAMWRFWRVVWSNRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQIESGNLSLHESGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEDGVVAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRHELRALHPDDPQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNQEPLYAKFRLREPITKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRSGSARRLVKAALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRGSSTKCASLSIRGGGVNLRPNSLAPCTTPSDHSMA | 400 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1227050 | 1231220 | + | CmaCh02G002690.1 | Cma02g00269 | 288020 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g00269 | 400 | CDD | PP2Cc | 51 | 358 | IPR001932 | - | |
Cma02g00269 | 400 | Pfam | Protein phosphatase 2C | 81 | 329 | IPR001932 | - | |
Cma02g00269 | 400 | ProSitePatterns | PPM-type phosphatase domain signature. | 84 | 92 | IPR000222 | GO:0043169 | |
Cma02g00269 | 400 | PANTHER | PROTEIN PHOSPHATASE 2C FAMILY PROTEIN | 20 | 390 | - | - | |
Cma02g00269 | 400 | PANTHER | ALPHABET, ISOFORM E-RELATED | 20 | 390 | - | - | |
Cma02g00269 | 400 | SMART | PP2C_4 | 42 | 356 | IPR001932 | - | |
Cma02g00269 | 400 | ProSiteProfiles | PPM-type phosphatase domain profile. | 50 | 358 | IPR001932 | - | |
Cma02g00269 | 400 | Gene3D | - | 39 | 368 | IPR036457 | - | |
Cma02g00269 | 400 | SUPERFAMILY | PP2C-like | 59 | 359 | IPR036457 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma02g00269 | Cma11g01366 | CCT | |
Cma02g00269 | Cma19g00750 | CCT | |
Cma02g00269 | Cma20g00740 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g00269 | Cma-Chr2:1227050 | Cma03g00656 | Cma-Chr3:5525611 | 0 | dispersed | |
Cma08g01281 | Cma-Chr8:7769430 | Cma02g00269 | Cma-Chr2:1227050 | 2.01E-152 | dispersed | |
Cma17g00372 | Cma-Chr17:2077279 | Cma02g00269 | Cma-Chr2:1227050 | 1.43E-158 | dispersed | |
Cma11g01366 | Cma-Chr11:9047629 | Cma02g00269 | Cma-Chr2:1227050 | 0 | wgd | |
Cma19g00750 | Cma-Chr19:7473265 | Cma02g00269 | Cma-Chr2:1227050 | 0 | wgd | |
Cma02g00269 | Cma-Chr2:1227050 | Cma20g00740 | Cma-Chr20:3468634 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g00269 | - | K01102 | csv:101221640 | 717.613 |