Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00325 ATGCTGCGAGCTTGTATGGGATTGATAGGGCTTTCCAATTGCAAAGATGAACTATGCGAGAAATTGTTTAAGAAAATAATCATGATCCATGATCCATGTTTGAAGGGGAGAAACCGCAGCGGAGACGAAGAATCCCACGCGATAACTCACAGCGAAGGCATGGCGGCTACTATGTCACCGTGGGGCAAGCCTGGAGCTTGGGCTCTGGATGCGGAGGAGCACGAGGCTGAGCTTCTCAAGGACCAGCAGGAGCAATCCCGTTCGCAATCGGAGCCCAGTGCCGACTTTCCGTCTCTCGCCGCCGCGGCTGCCACCAAGCCTAAGAAGAAGAAAGGTCAGTCCATTCCCCTATCGGAGTTTCATACCTATGGTGGTCCTAAGCCGTCGGCTCAATCCAGTGAGCCGAAGGGTCTTACGACCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGCGAACGGAGGAGGAACTGGACCGCGATCGGCTCGGAGGTGGTTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGATTCGTCGAATTCTCGACGCGGTTCTAGGGTTTTTGATGAGTCGAGGAGGAGTGGTGATGGATCCGATAGGGAGTTTGGAAGGGACTCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGCGCTGGGAAGAAGCCTATGATGGGCAATGGCTTTGAGAGGAGAGACAGAGGAGGAGGAGGAGGCTTTTTCGATTCGCAATCATCAAAAGCTGACGAATTGGATAGTTGGGTGTCGAATAAAAGCTTTTCACCTTCTGATGGTCGGAGATCAGGCGGTAGAGGTGGTGGATTTGAGAGAGAGCGAAGAGTAGGCTTTCCCTCGAACGGTGGTGGCGCCGATTCAGACAATTGGGACCGAAAATCTGAAGGTTCCAGGGGTAAAATTGGCGAGAATGGTGGTGGGGCTGATTCAGATAGCTGGGGAAAAAGATCTGAAGCAGTCAGAGGTGGAATTAGTGAGCGGCCGAGGCTTAATCTACAGCCTCGTTCACTCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCCGCAGTGAAGCCAAAGGCTTCCAATCCTTTTGGAAATGCTAGACCAAGGGAACAAGTATTGGCTGACAAGGGTCAGGACTGGAAGAAAATTGATGAGAAGCTCGATTCCATGAAAATTAAGGACACGGTTGTGAGAGCTGAGAGATCTAGTGGGGCTTCCTTCGAGAGAAAAGGCTTTGGAAGTCGAAATGCTTGGTCTCCCCAAGATCGTTCAGGGAGCGCATGGAGGAGGCCAGAATCTGTGGAGTCTCGTCCCCAGAGTGCTGAGGCGGTTGATGTTGGACCTGCTGCTGAGGAAAACTGA 1395 51.83 MLRACMGLIGLSNCKDELCEKLFKKIIMIHDPCLKGRNRSGDEESHAITHSEGMAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQSIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRDRLGGGFKSWGQNSLYDRGNRYSNGEDSSNSRRGSRVFDESRRSGDGSDREFGRDSLPSRADEIDDWGAGKKPMMGNGFERRDRGGGGGFFDSQSSKADELDSWVSNKSFSPSDGRRSGGRGGGFERERRVGFPSNGGGADSDNWDRKSEGSRGKIGENGGGADSDSWGKRSEAVRGGISERPRLNLQPRSLPLNNGNQEASGAAVKPKASNPFGNARPREQVLADKGQDWKKIDEKLDSMKIKDTVVRAERSSGASFERKGFGSRNAWSPQDRSGSAWRRPESVESRPQSAEAVDVGPAAEEN 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1568498 1572533 - CmaCh02G003250.1 Cma02g00325 288076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00325 464 Coils Coil 69 89 - -
Cma02g00325 464 MobiDBLite consensus disorder prediction 68 84 - -
Cma02g00325 464 MobiDBLite consensus disorder prediction 409 464 - -
Cma02g00325 464 MobiDBLite consensus disorder prediction 256 274 - -
Cma02g00325 464 MobiDBLite consensus disorder prediction 35 49 - -
Cma02g00325 464 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 54 447 - -
Cma02g00325 464 MobiDBLite consensus disorder prediction 173 191 - -
Cma02g00325 464 Pfam Plant specific eukaryotic initiation factor 4B 254 421 IPR010433 GO:0003743
Cma02g00325 464 Pfam Plant specific eukaryotic initiation factor 4B 60 286 IPR010433 GO:0003743
Cma02g00325 464 MobiDBLite consensus disorder prediction 192 229 - -
Cma02g00325 464 MobiDBLite consensus disorder prediction 35 388 - -
Cma02g00325 464 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 54 447 IPR010433 GO:0003743
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00325 Cma20g00766 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00325 Cma-Chr2:1568498 Cma12g00038 Cma-Chr12:142906 5.71E-30 dispersed
Cma11g01390 Cma-Chr11:9161690 Cma02g00325 Cma-Chr2:1568498 1.48E-12 wgd
Cma02g00325 Cma-Chr2:1568498 Cma20g00766 Cma-Chr20:3618353 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00325 - - csv:101214573 634.409