Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00439 ATGGCTCCAAACCCTCCCATTAGCCTCTCTTTTCTCTTCCTAACTCTTCCATTCGTCTTCTTCGTTCAATCTACGGAGCTTAGATATGATTTTTACGACGAGTCGTGTCCTCATTTGCCTATGATAATTCGAAATCATATTTGGGATGCTGTACAAAATGACACGAGAATTGCTGCATCACTACTACGGTTGCAGTTCCATGATTGTATTGTAGACGGATGTGATGCATCCGTGTTGCTTGATGATACTAAAGACATGAAAGGTGAGAAAAATGCTCCAGGCAATGTGAAATCGCTACGAGGGTTTGAAGTGATTGATGCCATAAAAACAGATGTTGAAACATATTGTCCCGAGACAGTTTCTTGTGTTGATATATTAAGTCTTGCAACTAGAGAAGCTGTGTATCAGGTCGAAGGGCCATCTTGGAGGGTTCCACTAGGACGTAGAGATGGCTTAACAGCAAACTTCAAATCCGTTCAAGAACAACTCCCATCTCCGAAGGCATCTCTAGAGAACAACACCGCCAAGTTCACCTCAAAGGGCCTCGATTTAAAGGACCTCGTCGTGCTATCAGGCGCACACACCATCGGCTTCGCTCGCTGCGTGACATTCAAGCTCCGCCTCTTCAACTACAAGGGCTCCGGCCAGCCCGACCCTGACATCAATGCAGCCATGCTCTCTGACTTGCAATCCATGTGCCCCAACAGAAACGACGGCACCAACGCCAATTTGGCCCCTCTGGATGTGGCCACTGTTGACAGTTTCGACAATGAGTACTACACGAACTTGATTAGTGGCGTGGGGCTTTTGGAGTCCGACCATGGTCTAATGGCCGACAGCAACACAGCTCAAATGGTTAGACAATATAGTTTTGATACGAACTTGTTTTATGATGACTTTGCTGAGTCGATGTTTAGGTTGAACACGGTTAGGGTTTTGAGTGGCCGTGATGGGCAAATTCGAAAGAATTGTCATGTTGTTAATGTCGATGATGGGTATTAA 1002 45.81 MAPNPPISLSFLFLTLPFVFFVQSTELRYDFYDESCPHLPMIIRNHIWDAVQNDTRIAASLLRLQFHDCIVDGCDASVLLDDTKDMKGEKNAPGNVKSLRGFEVIDAIKTDVETYCPETVSCVDILSLATREAVYQVEGPSWRVPLGRRDGLTANFKSVQEQLPSPKASLENNTAKFTSKGLDLKDLVVLSGAHTIGFARCVTFKLRLFNYKGSGQPDPDINAAMLSDLQSMCPNRNDGTNANLAPLDVATVDSFDNEYYTNLISGVGLLESDHGLMADSNTAQMVRQYSFDTNLFYDDFAESMFRLNTVRVLSGRDGQIRKNCHVVNVDDGY 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2235723 2237328 + CmaCh02G004390.1 Cma02g00439 288190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00439 333 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PANTHER PEROXIDASE 10 19 327 - -
Cma02g00439 333 PANTHER PEROXIDASE 72-RELATED 19 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Cma02g00439 333 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Cma02g00439 333 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 Gene3D - 30 328 - -
Cma02g00439 333 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00439 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cma02g00439 333 Gene3D Peroxidase, domain 2 164 307 - -
Cma02g00439 333 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00439 Cma-Chr2:2235723 Cma02g00457 Cma-Chr2:2382899 0 dispersed
Cma02g00439 Cma-Chr2:2235723 Cma20g00313 Cma-Chr20:1550512 8.07E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00439 K00430 - csv:101209504 516.538