Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00451 ATGTCAAATCGTCTCCTTTTCGTTGTCGTTCTTCTTCTTTACTTCCTTGCTAGCTCTATTGACTCGGTTTCTTTCAAAATCGATCGGTTTAAAACCAATGAAAGTGATACTCTTTATCAAGGAGATGCTATGCCATCTGTTGGAGCTGTTGAATTCAACAATGTTAAGTATCTTTGTCGCGTTGGTTGGGTTATCTATGAAGACATTGTCCCAATTTGGGACTCGAAAACAGGAAAAGCCACTGATTTCTCCACCCATTTTAGCTTCATTATTGATACCACAATTGTGCCAAATTATGGTAATGGATTAGCTTTCTTCTTAGCTCCACCAGGGTTTCAAATCCCTCCAAACTCCGGTGGTGGGTTTCTTGGCCTTTACAACACAACAAATAGTGATTCAACCCTCAACCAAATTGTTCATGTTGAATTTGATTCTTTCTACAATGAAGAATGGGATCCTCCATATGAACATGTGGGTATCAACGTTAACTCCATTCATTCTTCGAATTCCACGCGTTGGAATGCTAGTTTACATAGTGGGGATATGGCTGATGTGTGGATCTCCTACAATTCAACCACCAAGAACTTGAGCGTGTCCTGGAAATACCAAAATTCTTCGTCTACTTCCTTTGAAAATACCACCTTGAGCTACCATATTGATCTCACGAAGGTTCTTCCTCAATGGGCTACCGTGGGGTTTTCAGCTGCAACGGGCTTGAATGTAGAGAGACACACATTATTCTCTTGGGAGTTCAATTCAAGCTTGGATTTAGAGCAAGGAAGTGAAGATAACGGGAATAAAGTCGATATAATTGTCGGTGTAACCGTGTCAATAGGAGTATCAATCATCATGGGAATTGTAGCATTTGTTGTAATTTGGAGATTGAAACAAAAGAAACGAAAATTAGAAGAAGAAAATGGGAACGAGGTGAACTTGACATCGATTAATGATGATTTGGAGAGAGGGGCTGGACCGAGACGGTTTTCTCGCAAGCTTCTCGCCATGGCTACCAACAATTTCTCGAACGAAAGGAAGTTGGGTGAGGGAGGGTTTGGTGCAGTGTATAGAGGATATATTCCTGATCTTGGTTTGACCATCGCGGTGAAGAAGATCTCAAGGGGTTCGAGACAGGGACGAAAAGAATACATAACAGAGGTAAAGATCATTAGTAGACTTCGCCATCGGAATTTAGTGCAACTTATTGGTTGGTGTCATGATAAAGGTGAGTTCTTGTTAGTTTATGAGTTCATGCATAATGGTAGCCTTGATTCTCACATCTTTGGAAGGAAAAGCCCTCTTGTGTGGGGTGTGAGGTATAAAATTGCATTGGGTTTAGCCTCCGCGTTGCTATATCTTCATGAAGAATGGGAGCAATGCGTAGTTCATAGAGATATTAAGTCGAGCAATGTCATGTTGGATTCGAACTTCAATGTTAAGCTTGGAGATTTCGGGTTGGCTCGATTGATGGACCATGAGATGGGTGCGCAGACTACTGGATTGGTAGGGACTTGGGGATACTTGGCTCCGGAATACATAAGCACGGGTCGAGCGAGTAAAGAATCAGATGTGTTTAGTTTTGGAGTCGTTGCTTTGGAGATAGCAACAGGAAGGATGTCGAGGAACGCCATGGAAACGGGTTCTCATAAGGGTTTGGTGGAATGGGTTTGGGATCTTTATGGGAATGGAAAGGTTCTTATGGGTGTGGATGAGAAGTTGCAAGCTGATTACGACAGAAAACAAATGGAGTGCTTGATGATTGTCGGACTTTGGAGTGCTTATCCGGACCCTAATCTTAGACCTTCAATACGACAAGTGATTCAAGCTCTTAATTTTGAGACGACAATGCCAAGTCTTCCAGATAAAATGCCAGTTGCTGTGTATTATGCTCCTTCCACATCGATGAGCTCAAATGAGCCTCCAATTACATCAAGTCTTGACATGGGTCGGTGA 1950 42.26 MSNRLLFVVVLLLYFLASSIDSVSFKIDRFKTNESDTLYQGDAMPSVGAVEFNNVKYLCRVGWVIYEDIVPIWDSKTGKATDFSTHFSFIIDTTIVPNYGNGLAFFLAPPGFQIPPNSGGGFLGLYNTTNSDSTLNQIVHVEFDSFYNEEWDPPYEHVGINVNSIHSSNSTRWNASLHSGDMADVWISYNSTTKNLSVSWKYQNSSSTSFENTTLSYHIDLTKVLPQWATVGFSAATGLNVERHTLFSWEFNSSLDLEQGSEDNGNKVDIIVGVTVSIGVSIIMGIVAFVVIWRLKQKKRKLEEENGNEVNLTSINDDLERGAGPRRFSRKLLAMATNNFSNERKLGEGGFGAVYRGYIPDLGLTIAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMHNGSLDSHIFGRKSPLVWGVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHEMGAQTTGLVGTWGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRNAMETGSHKGLVEWVWDLYGNGKVLMGVDEKLQADYDRKQMECLMIVGLWSAYPDPNLRPSIRQVIQALNFETTMPSLPDKMPVAVYYAPSTSMSSNEPPITSSLDMGR 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2340668 2342617 - CmaCh02G004510.1 Cma02g00451 288202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00451 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Cma02g00451 649 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00451 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 255 IPR013320 -
Cma02g00451 649 CDD STKc_IRAK 346 610 - -
Cma02g00451 649 SMART serkin_6 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00451 649 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 9 649 - -
Cma02g00451 649 PANTHER - 9 649 - -
Cma02g00451 649 SUPERFAMILY Protein kinase-like (PK-like) 324 631 IPR011009 -
Cma02g00451 649 Pfam Legume lectin domain 23 261 IPR001220 GO:0030246
Cma02g00451 649 Gene3D - 20 269 - -
Cma02g00451 649 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Cma02g00451 649 CDD lectin_legume_LecRK_Arcelin_ConA 23 255 IPR001220 GO:0030246
Cma02g00451 649 Pfam Protein kinase domain 341 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00451 649 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524
Cma02g00451 649 Gene3D Transferase(Phosphotransferase) domain 1 417 631 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00451 Cma-Chr2:2340668 Cma04g00857 Cma-Chr4:4387318 0 dispersed
Cma02g00450 Cma-Chr2:2333105 Cma02g00451 Cma-Chr2:2340668 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68326 PF00069 Pkinase 1.50E-47 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00451 - - csv:101203101 1089.33