Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00457 ATGGCTCCAAAAACTCCCATTAGCCTCTCTTTTCTCTTCCTAATTCTTCCCATTTTCTTCTTCATTCAAGCTCTCTCTGCCCCTAATTATAATTATAACTATCAGAAAGCTTACAATGAGCTCAGTTATGATTTTTATGACAAATTGTGCCCTCGTTTGCCAATGATAATTCGATATCGTGTTTGGGCTGCCGTACAAAACGACTCTAGAATTGCTGCATCACTACTACGATTGCAATTCCATGACTGTATTGTAGATGGATGTGAAGCATCGGTGCTGCTTGATGATACTAAAGATATGAAAGGTGAGAAAAATGCTCCAGGAAATGTGAAATCGCTACGAGGGTTTGAAGTGATCGATGACATTAAAGCGGATGTCGAAACATATTGTCCAGAGACAGTTTCATGTGTTGATATATTAGGTCTTGCAGCTAGAGAAGCGGTGTATCTGGTCGGAGGGCCATCTTGGAACCTTCCACTAGGACGTAGAGATGGCTTAACTGCAAGCAAAAAATCCGTCTTGGAACAGCTCCCATCGCCCAAGGCATCTCTTGAGAATAACACAGCCAAGTTCACCTCAAAGGGCCTCGATTTAAAGGACCTCGTGGTGTTATCAGGCGCACACACCATCGGCTTCGCTCGTTGCGTGACATTCAAGGTCCGCCTCTTCAACTACAAGGGCTCCGGCCAGCCCGACCCTGACATCAACGCAGGCATGCTCTCCGACTTGCAATCCATGTGCCCCAACAGAAACGACGGCACCAACGCCAATTTAGCCCCACTGGATGTGGTCACTGTTGACAGGTTCGACAATGAGTATTACACGAACTTGATTAGTGGCGTGGGGCTTTTGGAGTCGGACCATAGTCTAATGGCCGACAGCTACGCAGCTCATATGGTGAGACAATATAGTTATGATACGAATTTGTTCTATGATGACTTTGCTGAGTCGATGTTGAGGATGAGCTTGGTTGGGGTTTTGAGTGGGCGTGATGGGCAGATTCGAAAGAATTGTCATGTTGTTAATGTCGATGATGGGTATTGA 1044 45.59 MAPKTPISLSFLFLILPIFFFIQALSAPNYNYNYQKAYNELSYDFYDKLCPRLPMIIRYRVWAAVQNDSRIAASLLRLQFHDCIVDGCEASVLLDDTKDMKGEKNAPGNVKSLRGFEVIDDIKADVETYCPETVSCVDILGLAAREAVYLVGGPSWNLPLGRRDGLTASKKSVLEQLPSPKASLENNTAKFTSKGLDLKDLVVLSGAHTIGFARCVTFKVRLFNYKGSGQPDPDINAGMLSDLQSMCPNRNDGTNANLAPLDVVTVDRFDNEYYTNLISGVGLLESDHSLMADSYAAHMVRQYSYDTNLFYDDFAESMLRMSLVGVLSGRDGQIRKNCHVVNVDDGY 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2382899 2384683 - CmaCh02G004570.1 Cma02g00457 288208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00457 347 SUPERFAMILY Heme-dependent peroxidases 40 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 Gene3D Peroxidase, domain 2 178 321 - -
Cma02g00457 347 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Cma02g00457 347 ProSiteProfiles Plant heme peroxidase family profile. 40 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PANTHER PEROXIDASE 10 28 341 - -
Cma02g00457 347 PANTHER PEROXIDASE 72-RELATED 28 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Cma02g00457 347 Pfam Peroxidase 59 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00457 347 Gene3D - 44 342 - -
Cma02g00457 347 CDD secretory_peroxidase 40 341 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00439 Cma-Chr2:2235723 Cma02g00457 Cma-Chr2:2382899 0 dispersed
Cma02g00457 Cma-Chr2:2382899 Cma03g00990 Cma-Chr3:6983239 8.71E-129 dispersed
Cma02g00457 Cma-Chr2:2382899 Cma16g00634 Cma-Chr16:3271830 3.72E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00457 K00430 - csv:101209504 526.939