Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00473 ATGATTTCCGTTGCCCCATTGTGCGGCGGCGAAAAGCCCAAACTCTCCTCATCTCCGCCGCCACGTGTTTACCGATCGAAATTACCGGATATTACAATCCCCGACCATCTCCCTCTTCACGATTATTGCTTTGAGAAAATCTCTGAATTTTCCGACCGCCCATGTTTGATCGTCGGCGCCACCGGAAAATCCTATTCCTTCTCCGAAACCCACTTATTCTCCAAGAGGGCCGCCGCCACTTTTTCTAAACTTGGCGTTAAGAAAGGGGATAACTCTGCTGAATTTGTTTTTTCTTTTATGGGTTCGTCCATGATTGGCGGTGTCGCCACCACTGCTAATCCGTACTACACGGCGGCGGAGATTTCCAAGCAATTGGAGATGTCGGGTGCTAAATTGGTGGTTACTTACTCGCATTGTGTTGACAAGCTCCGGGAATCTGACGTGGATCTCACCATTATTACCGTCGATGATCCGCCGGAGAATTGTTTGAGCTTCTCGATGGTTTACGATGCCGATGAAAATGACGTTCCGTTCGTGGAAATTGACTGGAATGACACTGGTTACGGGATGACGGAAGCAGGCCCGATGTTGAGTATGTGCACGGCTTTTGCGAAAGAGCCTCCGCTGCCAACAAAAATAGGTTCATTGAGTGAATATCATATTTTGAATAGTTTTTGCTACCGGGGCTCCACACTTGAGCTAGTGATCTCTCTGAGAGCTTCTGCACCACGTTCCAGCGCCTCCGGATCAAACCCGGACGACGACGTCCTCGGATTATCATTTCGAACCTTAGGGGCAGACGTCTCAGAATTAGCATTCGACGAGGCAGATTGTGCAGCAGGAGAAGCGGAAACGGGGGAGATATTGAAGGGGCCATCGGCATAA 885 49.6 MISVAPLCGGEKPKLSSSPPPRVYRSKLPDITIPDHLPLHDYCFEKISEFSDRPCLIVGATGKSYSFSETHLFSKRAAATFSKLGVKKGDNSAEFVFSFMGSSMIGGVATTANPYYTAAEISKQLEMSGAKLVVTYSHCVDKLRESDVDLTIITVDDPPENCLSFSMVYDADENDVPFVEIDWNDTGYGMTEAGPMLSMCTAFAKEPPLPTKIGSLSEYHILNSFCYRGSTLELVISLRASAPRSSASGSNPDDDVLGLSFRTLGADVSELAFDEADCAAGEAETGEILKGPSA 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2484147 2492928 + CmaCh02G004730.1 Cma02g00473 288224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00473 294 Pfam AMP-binding enzyme 46 159 IPR000873 -
Cma02g00473 294 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 22 185 - -
Cma02g00473 294 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 187 215 - -
Cma02g00473 294 Gene3D - 19 186 IPR042099 -
Cma02g00473 294 PANTHER 4-COUMARATE--COA LIGASE 3 22 185 - -
Cma02g00473 294 PANTHER 4-COUMARATE--COA LIGASE 3 187 215 - -
Cma02g00473 294 SUPERFAMILY Acetyl-CoA synthetase-like 22 187 - -
Cma02g00473 294 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00473 Cma-Chr2:2484147 Cma11g00400 Cma-Chr11:1971997 8.81E-50 dispersed
Cma02g00473 Cma-Chr2:2484147 Cma05g00666 Cma-Chr5:3423758 6.34E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00473 K01904 - csv:101221344 283.108