Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00491 ATGAGCTGCCATTGGAGCTGCAGAGTTCTTGCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATGTTGTTGTGATGGCTTGAATTCTGATGGAGTTTTCTTGCTTTCCTTTAAGTATGGCGTTTTGGACGACCCTCTTTTTGTGCTTCAGAACTGGAATTACTCCGATGACACGCCGTGTTCATGGCGGGGTGTCACCTGCGGCGGTGATGGTGCTACGGTTACAGCTTTATCGCTACCCAATTCTCTGCTTATGGGCTCTGTTTCTTCTGATCTGGGTTTGATTCAAAGCCTTCAATTTGTTGATCTTTCGAACAATTCCTTTAATGGGTCTCTTCCTTTGTCTCTGTTCAACAATTCCATGCTTCGGTTTCTTGATTTGTCGGAGAATTTGATTTCCGATGAGGTTCCGGCGGCGGTGGGTCGACTTGGGAATCTGCAAGTTCTTAACCTCTCCGGCAATGCTCTGTTCGGGGAGTTTCCGAGTGATCTTGCGAATTTGGGTAATCTCACGGTTATATCTCTTAAGAACAATTACATTTCCGGGGAACTTCCTGGTCGGTTTGGAACGGTTGAGGTTTTAGATCTGTCTTCTAATTTGATTAATGGGTCTTTGCCGTTCGATTTTGGTGGCGACAGTTTACGTTACTTCAACATCTCGTATAATAGACTTTCCGGCCAAATCCCGCCGGATTTCGCCCACAAAATCCCAGCCAACGCCACGATTGATCTCTCATTCAACAACTTCACCGGTGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCAAACTCCTTCGCCGGAAACCGCCAACTCTGCGGCGAGATAACGAAAACTGCATGCCCAATTCCTTCGTCGCCGGCGTCTCTCCCACCGGCAATCGCCGCCATGCCAATTGACCCAAGTACCCCAGAAACCACCTCGCCGGAAAAAGAGAGCGGAACAGGGCTAAAATCCTCAACTATAGTCGCGATTGTACTCGGCGACGTCGTCGGATTAGCAATTCTGTGCCTCCTCTTCTTCTACGTCTACCACTTGAAGAAAAAAAACAAAACCGACGAAACCCATTTGAAAAACGAATCCAATTTGGCCAAAGACAGCTGGTCCACATCTTCATCGGAATCCAGAGGATTTTCGCGATGGTCCTGCCTGAGAAAAAAAGAGTATCCAGAAGAGGGAAATTCCGAGCAGGTTAGTATCGGTTCCATCTCCGGCCGCCGCGACACAACGGAGGAGGGCGGAGAAGGGAACAAAAGGGGAACTTTAGTGACAGTAGACGGCAGAGAGAAAGAGCTGGAACTTGAGACGCTATTGAAAGCATCGGCGTACATTCTCGGCGCTACAGGATCGAGCATAACGTACAAGGCAGTGCTGGAAGATGGCACTGCATTTGCAGTGCGGAGAATCGGCGACGGCGGAGTTGAAAAGTATAAAGATTTTGAGAATCAGATTCGAGTTGTAGCTAAATTGGTTCATCCAAATTTGGTTCGTGTTCGTGGGTTCTATTGGGGCATCGATGAGAAGCTCATCATTTATGAGTTCGTTCCTAATAGTAGCCTTGCCAATGCCCGTCACAGGAAAGTGGGCTCTTCACCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATAGCAAAAGGAGTAGCCCGTGGCCTTTCTTATCTGCATGACAAGAAGCACGTCCATGCCAACTTAAAACCTAGCAACATTCTTTTGGGCTACAATATGGAGCCCAAGATAGGCGACTTCGGTCTCGAGAAGGTCTTATTCGGTGATTCGACTTACAAAACGGGTAGCTCGACTCGAAATTTCGGGAGTAAGAGGTCAACTGCATCTCGTGATAGCTTCCAAGACTTTGTTACTGGACCTAGCCCTGGACCAAGTCCAAGTCCTAGCTCGATCAGTGGAGTGTCACCATACCTAGCACCAGAATCACTTCGAAGCTTGAAGCCTACTCCAAAGTGGGATGTGTACTCTTTTGGAGTGATACTACTCGAGCTACTAACAGGAAAGATCGTTGTGTTAGATGAGTTGGGTCAAGGGCTTGAGCTTGCCGTCGACGATAAAAGTCGAGCCTTAAGAATGGTTGACATGGCGATTCGAGCTGACATGGAGGGGAGAGAAGATGCATTATTATCATTCTTTAAATTAGGTTATAGTTGTGCATCTCCTACCCCACAAAAGAGACCATCCATGAAAGAAGCCTTACAAGTTTTGGAGAAATTTCCAACTATATCCACGTCATCACACTATTATGGTCTCTAG 2268 47.18 MSCHWSCRVLALLLLLLLLLLQCCCDGLNSDGVFLLSFKYGVLDDPLFVLQNWNYSDDTPCSWRGVTCGGDGATVTALSLPNSLLMGSVSSDLGLIQSLQFVDLSNNSFNGSLPLSLFNNSMLRFLDLSENLISDEVPAAVGRLGNLQVLNLSGNALFGEFPSDLANLGNLTVISLKNNYISGELPGRFGTVEVLDLSSNLINGSLPFDFGGDSLRYFNISYNRLSGQIPPDFAHKIPANATIDLSFNNFTGEVPVSDVFMNQEANSFAGNRQLCGEITKTACPIPSSPASLPPAIAAMPIDPSTPETTSPEKESGTGLKSSTIVAIVLGDVVGLAILCLLFFYVYHLKKKNKTDETHLKNESNLAKDSWSTSSSESRGFSRWSCLRKKEYPEEGNSEQVSIGSISGRRDTTEEGGEGNKRGTLVTVDGREKELELETLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRVRGFYWGIDEKLIIYEFVPNSSLANARHRKVGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHANLKPSNILLGYNMEPKIGDFGLEKVLFGDSTYKTGSSTRNFGSKRSTASRDSFQDFVTGPSPGPSPSPSSISGVSPYLAPESLRSLKPTPKWDVYSFGVILLELLTGKIVVLDELGQGLELAVDDKSRALRMVDMAIRADMEGREDALLSFFKLGYSCASPTPQKRPSMKEALQVLEKFPTISTSSHYYGL 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2599082 2601932 - CmaCh02G004910.1 Cma02g00491 288242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00491 755 MobiDBLite consensus disorder prediction 600 624 - -
Cma02g00491 755 PANTHER BNAC07G16060D PROTEIN 9 745 - -
Cma02g00491 755 ProSiteProfiles Protein kinase domain profile. 441 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00491 755 SUPERFAMILY L domain-like 33 276 - -
Cma02g00491 755 MobiDBLite consensus disorder prediction 303 317 - -
Cma02g00491 755 MobiDBLite consensus disorder prediction 394 423 - -
Cma02g00491 755 Gene3D Ribonuclease Inhibitor 190 285 IPR032675 -
Cma02g00491 755 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Cma02g00491 755 Gene3D Transferase(Phosphotransferase) domain 1 517 751 - -
Cma02g00491 755 MobiDBLite consensus disorder prediction 600 638 - -
Cma02g00491 755 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 745 - -
Cma02g00491 755 MobiDBLite consensus disorder prediction 294 317 - -
Cma02g00491 755 Gene3D Phosphorylase Kinase; domain 1 416 516 - -
Cma02g00491 755 SUPERFAMILY Protein kinase-like (PK-like) 446 741 IPR011009 -
Cma02g00491 755 Pfam Protein kinase domain 447 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00491 755 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515
Cma02g00491 755 CDD STKc_IRAK 447 743 - -
Cma02g00491 755 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00491 Cma20g00971 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00491 Cma-Chr2:2599082 Cma04g00474 Cma-Chr4:2417923 0 dispersed
Cma02g00491 Cma-Chr2:2599082 Cma20g00971 Cma-Chr20:4949033 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68327 PF00069 Pkinase 1.40E-32 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00491 - - bhj:120088533 1214.52