Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00505 ATGGATATTCTCCTACTTTCAATTCCCCTCCTTCTACTTTCTCTTCTCTTCGCCTTCAACTTTCTCCAAACCCCTCATCGCCTCAACCTCCCACCAACACCACTCTTCTCCCTTCCACTAATAGGCCATTTCCATCTCCTCAAACACCCCCTCCACCGATCACTCCACAACCTCTCACAAAAACACGGCCATGTCATCTCTCTCCGATTCGGCTCACGCCTTGTCGTACTCATATCCTCCCCCTCAGCCGTTCAAGAATGCTTCACAAAAAACGACATCATTCTCGCAAATCGCCCATTGCTCGACACCGGAAAGTACTTAGCATACAACCACACAACCCTCGCCATCTCCCCTTACGGCGAGCACTGGCGAAACCTCCGCCGGATTTGCTCCCTCGAGATTTTCTCAACCAGCCGCCTCAATCTGTTCTTGGGTATCCGACAAAATGAAGTGAAACGGTTGCTGAGGAAGTTATGTGGGGATTGGTTGGAAGAGTTTAGGGAAGTGGAAGTGGAGCCGATGCTGTCGGATCTTACTTTCAATGTTGTTATGGGAATGGTGGGTGGAAGGAGGTTTTATGATGAGGGGTATTCTAAGAAGTTTAGAGATTTGGTGACACAAATTATGGCGCATGGTGGGTCGTCCAATCCGGGTGATTTCATACCCTTATGGAATTGGGTTGATCCAACTGGTTTTAAGAAGAGGATAATGAATCTTGCACGAAGAGGAGATGAACTTCTTCAAGAACTAATTGATGAAGCTCGAGATGGAAAGGATGGAGGGAACTCTATGATTCATCATTTACTTTGCTTGCAGAAAGATGAGCCGGAGTATTATAGTGACCTTATTATCAAAGGACTTATACAAGTTATATTCTTAGCCGGGATTGACACGTCAGCTGTGACATTAGAATGGGCGCTATCGCATTTGCTCAACAATCCAGACGTGTTAAAGAAAGCAAGAGCTGAGATAGATGATTTGATAGGGAAAGAGCGGCTAGTGAATGAAAGTGATCTTCCAAATTTGAGGTATCTTCAAGGAATAATCTCTGAGACATTGCGGTTGAACCCAGCTGCTCCTCTTCTTGTGCCACACTGTGCATTTCAAGACTGCAAAATAGAAGGATATGATGTTCCTCGTGACACAATTGTATTGATTAATGCTTGGGCTATACATAGAGACCCAGATCTATGGGAAGATCCCACGGCGTTTAAACCAGAAAGACATGGTGACTCGAGTGGAGCTGATTCTTACAAGCTACTGCCATTTGGGTTGGGGCGGAGAGCTTGTCCTGGTGTGGGAATGGCGCAACGCGTGGTTGGCTTAGCTTTAGCGTCGTTGATACAAGGCTTTGAATGGGAAAGAGTGAGCAGCTCGTTGGTTGATATGAGTGAAGGTCAAGGGCTCACTATGCCCAAAGCTCAACCATTGGTAGCCAAGTGTAAGCCACGCCCAATCATGAAAGCCATTATGAACGTAGAAATTGATAATATTTGA 1497 45.89 MDILLLSIPLLLLSLLFAFNFLQTPHRLNLPPTPLFSLPLIGHFHLLKHPLHRSLHNLSQKHGHVISLRFGSRLVVLISSPSAVQECFTKNDIILANRPLLDTGKYLAYNHTTLAISPYGEHWRNLRRICSLEIFSTSRLNLFLGIRQNEVKRLLRKLCGDWLEEFREVEVEPMLSDLTFNVVMGMVGGRRFYDEGYSKKFRDLVTQIMAHGGSSNPGDFIPLWNWVDPTGFKKRIMNLARRGDELLQELIDEARDGKDGGNSMIHHLLCLQKDEPEYYSDLIIKGLIQVIFLAGIDTSAVTLEWALSHLLNNPDVLKKARAEIDDLIGKERLVNESDLPNLRYLQGIISETLRLNPAAPLLVPHCAFQDCKIEGYDVPRDTIVLINAWAIHRDPDLWEDPTAFKPERHGDSSGADSYKLLPFGLGRRACPGVGMAQRVVGLALASLIQGFEWERVSSSLVDMSEGQGLTMPKAQPLVAKCKPRPIMKAIMNVEIDNI 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2704533 2706659 - CmaCh02G005050.1 Cma02g00505 288256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00505 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Cma02g00505 498 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 490 - -
Cma02g00505 498 SUPERFAMILY Cytochrome P450 31 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 11 490 - -
Cma02g00505 498 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 Pfam Cytochrome P450 31 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 Gene3D Cytochrome P450 20 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma02g00505 498 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00505 Cma-Chr2:2704533 Cma20g00980 Cma-Chr20:5112338 0 dispersed
Cma20g00976 Cma-Chr20:5079793 Cma02g00505 Cma-Chr2:2704533 4.03E-17 dispersed
Cma02g00505 Cma-Chr2:2704533 Cma03g00950 Cma-Chr3:6782028 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00505 K13260 - mcha:111017884 751.51