Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00580 ATGATTCAAAGCGGTAATCAGAAAACCAAAATCCTTCCCATTTCTCACCCTTTCCTCTCTTTTCCCTCCCACTGCCACGCCACCGGCCACCGCCCCGGCCGCCGCCCCGCCCACGCACACCGTCTGCACCATTTTCCTTTTACTTTTCCCCTTTCCTTCTTCTCCATTTCTCCCTCTCGGCCGCAGATATTGAAAAAGATGTCGGGCCAAACCCAGCGTTTGAATGTAGTTCCAACAGTTACAATGCTTGGAGCGATGAAAGCTCGTCTTATTGGTGCAACCAGAGGTCATGCTCTCCTCAAGAAGAAGAGTGATGCTTTGACTGTTCAGTTCCGTCAGATACTCAAGAAGATTGTCTCAGCTAAGGAATCAATGGGAGAAGTCATGAAGACATCTTCATTTTCTCTTACTGAAGCGAAATATGTTGCTGGTGACAACATCAAGCACATTGTCCTAGAGAATGTCCAAAATGCAGCTATTAAGATTCGATCTCGGCAGGACAACATTGCTGGTGTAAAACTCCCGAAATTCGAACATTATTCGGATGGGGAGACCAAAAATGATCTCACAGGGTTAGCCAGGGGTGGACAACAGATCCAGCTATGTCGTGGTGCGTATGTAAAAGCAATTGAGGTTCTTGTTGAGCTTGCTTCACTTCAGACGTCATTTTTGACTCTTGACGAGGCAATTAAAACCACAAACCGCAGGGTTAACGCTCTGGAGAATGTGGTGAAGCCAAGGATAGAGAATACTATAAGTTACATCAAGGGAGAACTGGACGAGCTAGAAAGGGAAGATTTCTTCAGACTGAAAAAGATTCAGGGTTATAAGAGAAGGGAAATCGAGAGACAACGAGCCAACGCCAAGCTATATGCCGAGGAACAGCTTGCTGAGAAGGTGTCATTGCAGAAGGGCGTCTCCATAAGTTCAGCTTACAGTCTATTGTCTGCAGCTGGTGAGAAGGATGAGGATATTATATTTTGA 984 46.04 MIQSGNQKTKILPISHPFLSFPSHCHATGHRPGRRPAHAHRLHHFPFTFPLSFFSISPSRPQILKKMSGQTQRLNVVPTVTMLGAMKARLIGATRGHALLKKKSDALTVQFRQILKKIVSAKESMGEVMKTSSFSLTEAKYVAGDNIKHIVLENVQNAAIKIRSRQDNIAGVKLPKFEHYSDGETKNDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRANAKLYAEEQLAEKVSLQKGVSISSAYSLLSAAGEKDEDIIF 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3356767 3361087 + CmaCh02G005800.1 Cma02g00580 288331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00580 327 Pfam ATP synthase subunit D 83 274 IPR002699 GO:0046961
Cma02g00580 327 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 75 277 IPR002699 GO:0046961
Cma02g00580 327 Gene3D - 66 264 - -
Cma02g00580 327 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 67 327 IPR002699 GO:0046961
Cma02g00580 327 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 67 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00580 Cma-Chr2:3356767 Cma11g01948 Cma-Chr11:12799292 2.45E-178 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00580 K02149 - csv:101213101 477.633