Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g00585 | ATGAGGCTCTTCTCCTCCTCAACTTTCTCGCTTTCTTCTCTCTGTTCTTCTTCTCCACCGCGCGCCCTCTTGCTTCACTTTTCTCATTCAGCTTCTTTTTCTTCCAGTAATTACTCTTTCCCTTCCTCATCTTCTTCTAGGCGCTACGACGAAGAGTCTCGATATGTCAGGGTTTCGGTTTGGTGGGACTTCGAGAATTGCAACATTCCTGCAGGTGTTAACGTGTTTAAGGTCGCCCATTTGATCACTGCCGCTGTCAGGGCCAATGGTATCAAAGGTCCGGTTCAAATTACTGCTTTCGGTGACATTTTGCAGCTCTCAAGGACCAACCAGGAGGCTCTCTCGTCTACTGGAATTAGCCTTACCCACATTCCTCAAGGTGGTAAAAACAGTGCTGATAGGTCTCTTCTTGTAGATCTCATGTGTTGGGTTTCACAAAATCCTCCACCAGCACATCTTTTTCTAATTTCTGGTGACAGGGACTTCGCCAGCATTTTGCACCGCTTAAGAATGAATAACTACAATGTGTTGCTAGCAAGCCCTGAAAGTCCTCCTGGTGTTTTATGCAGTGCTGCAAGCATCATGTGGCATTGGAATGCTCTGATTAAAGGGGAAAATCTAGTCGGAAGGCATTTTAATCAACCACCTGATGGACCGTATGGTTCTTGGTATGGCCATTATAAAGTTCCTCTTGAAGACCCATTTCCAGTTAATGAGCAAGCATCTTCTATTCGATCCGAGGAGGTTTCTGAGATCAGTTCAGATCCTAAGCCTCTTTCCATTCCAAGGGCAGTCATTAGGGAAATACGTTACATTTTGAAATTATATCCAAAAGGAATCTCCATTACAGATCTCCGATCAGAGTTGGGAAAGAGTAAAATATCTATAGATAGGGACTATTATGGTTACAAAAAGTTTTCACGCTTTCTATTGTCAATGCCACATATTTTAAAGCTTCAAACAAATGGTGATGGCCAATTGATCGTCCGAATTGTCACTCCAAGGACCATAGAGCCATTTGAGTCCAGTAGAGGTACATCTGATAATGATGGCACTGAAGAGCAGGATCGTAATCTGATTGCAAAGTTAAACAATAACGATTCCTCACCAGAATCGACGAGTGTACCACTCGTTCGATCTAGTGAACTAAATGCTCAAGACAGGCCAGAGAAGGTGCAACCATCTTATGAATTAGTCAAGTCTACTGGTGAAGCTATGGGAGGGGAACCATCAACATGGCCGGTTTCTGAGTCACGTGTTCTGGAAGATTCAAAGCAGACTAGTAAATTTGAAGCTGACAATAATGTGATTCCTTCAATTGAACAGCATTCTGAGGCCAAGACGGGGTTTTTTAGAAGAATATGGAGAAGGTTTGTTGTAGGTAGCAAAGACCATAATTCTGAAAATGGAAGTCATCACATTTCTGAAAAATGTTCCACATCAGATGATGCTTCTAAGCAGAAAAGTTGTGGCCATGTGACGAATTATTCTAATCAGAACCTTGGAGAAGCAAAAAGTGAAGGAAAAACTGTAAAGCCAATGAGTCAAGATGCTAATTCAGTGCGTCCAGTTTCAAATTCACCTGATCGTGAGCCTGCTAAGCTTCAAAAAACAGCTGTAGTTGCTAGTGCATATGATGATAAATCAAGATCTAGGCCAGGAGCACTTAGTAGCATTAGAAATTGGTTCAAGATTCGGGAAAATGATACAGAGACTGGTAAAGAAAGCGAGCACTGTTGCGAACAGAACCAGTTAAAAAATGAATGTGGGAAACATCGACTTTTTTCCAGCAATTCTTTTTGGCAGGACATGCAATCCTTTATTGAAACACCTAAAGGAGTGGAGCTCATTTTGCAGTCAAAAACCAGGTCAGAGATGGCTCAGAAACTGCTAGAGGGAGGACCTTTGGTTCTTAAATCCTTAAGCTCTAGCGAGCTCTTTGACTTTATAGAATCGTTAATATCAGATAAGAAATGGCTCGTGGAATGCCCCTCTGAAACAAATCCTTTTAAGGTCACTCTCTCTACTGCTGAGACAAGCTCTTGCACGAAACCCCTGCATCGTGCAAATGGGTTGACATCAATCTTTATGAACAAAGTATCACAGCCCAGTTTACAGGGATCTTCAGAACATGATTCAGATTCAGATAAGAAAAATGAAAATATTCCTCAAGCTGGAATTTCTACCACTATGACTAAAAGCAAGTTTCCAGAGAGGACAAGAAGTGAAATATTATGCGACTGTCAAAATCTTGTGGACGCAATCTTGAGGGAACACCCAGAAGGATATAATATGGGGGCTTTCAGAAAACTGTTTCTTGAGAAGTACGGATATCATCTTGACTTGCAGAAGCTTGGTTACCCAAAGTTGGCATCCCTGCTACAGATAATGCCTGGAGTGACAATAGAATCCACTTTTATAGTTCCCACCGGTAAGGTCCCAAAGGTTTCCCATGTTGTAGCAAACTCTGATAACGAATCATCTGACCTGCCTCGAAAGGATGATGATTTTGAGTCAACATGGGAAGAATTAGGTCCAGCATTCACAGATTGCAGGAGCAGAAACGAAGATGAATCGACATCGAGTAGTGAAACAGCAGAAGCAACAGAAAAACGACCAAAAGTTTGTTATGAACCTGTGGTTTTAGAGGATGAATCATCAACAGAGTCTGATGGAGAGTCTTGTCCTACTACACAGAGATCAGCAGAGCAAGCAAAGCCACAAACAAATAAGGAAGAAAGCCCATTACTACAGATCCTTGATTCATGGTATGGCAACAAAGAAGACATTAGTAGCAAAAACAAGTCGGAAAACAGCGACGAGATGAACGGTTGTTTTGAAAATAGTTTGAAGGTCTCTAGTTTAACAGCCAAAAATGAAGCAAATACAGGAAGCTTTGCTCAAAAGCATAGACATCAAAAGAACTATTCTTTTGTTTTAGACACGGATGAAAATGACAAAGAAAAGCTGATTGATGGGATTTTGGGTACCTTGAAGAAATCGAGCAAGTCCCGGAGCATAAGTTTCCAAATTCACAAAGAAAATGGTGGCGATGATGTGAGTATCAAAGTCCTTTACTGTGGGGTTTGCCATTCAGATCTGCATCTGCTGAAGAACGATTGGGGTGTCACAGATTATCCAATAGTCCCAGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGGAACAATGTGAACAAATTCAAAGTGGGCGATCAAGTAGGGGTAGGTGTCATAGTTGGATCTTGCAAAAGTTGCCAAAACTGCGAACAAAACTTAGAGAATTACTGCCCCAAGTTGATATATACTTACAACGGACATTCATATGATGGAGCAAAGACTTACGGTGGTTATTCTGATAGCATCGTCGTCGATCAGCATTTCGTTCTCCGATTTCCCGACAACTTACCCCTTGATGCCGGAGCTCCACTTCTGTGCGCTGGAATCACAATCTATAGCCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGATTGAAAGTTACTGTCATTAGCACGTCTCCGAGAAAGAAGGAGGAAGCTATCAACAGGCTTGGTGCCGATGCTTTCGTTGTTTCGAGTGATCCTGCACAATTGAAGCTGAATGGAAAATTGGTGACTGTGGGGTTACCTAACAATCCACTAGAACTGCCAGTTGCTTCGATAGTATTCGGTAGGAAGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGGTAAACATAACATCACAGCGGAGATTGAGCTGATTCGTATGGACGATATTAACACCGCCATCGAACGCCTTGAGAAAGCCGATGTTCGATATCGGTTCGTGATTGACATTGGAAACTCCTTCAAATAG | 3936 | 42.2 | MRLFSSSTFSLSSLCSSSPPRALLLHFSHSASFSSSNYSFPSSSSSRRYDEESRYVRVSVWWDFENCNIPAGVNVFKVAHLITAAVRANGIKGPVQITAFGDILQLSRTNQEALSSTGISLTHIPQGGKNSADRSLLVDLMCWVSQNPPPAHLFLISGDRDFASILHRLRMNNYNVLLASPESPPGVLCSAASIMWHWNALIKGENLVGRHFNQPPDGPYGSWYGHYKVPLEDPFPVNEQASSIRSEEVSEISSDPKPLSIPRAVIREIRYILKLYPKGISITDLRSELGKSKISIDRDYYGYKKFSRFLLSMPHILKLQTNGDGQLIVRIVTPRTIEPFESSRGTSDNDGTEEQDRNLIAKLNNNDSSPESTSVPLVRSSELNAQDRPEKVQPSYELVKSTGEAMGGEPSTWPVSESRVLEDSKQTSKFEADNNVIPSIEQHSEAKTGFFRRIWRRFVVGSKDHNSENGSHHISEKCSTSDDASKQKSCGHVTNYSNQNLGEAKSEGKTVKPMSQDANSVRPVSNSPDREPAKLQKTAVVASAYDDKSRSRPGALSSIRNWFKIRENDTETGKESEHCCEQNQLKNECGKHRLFSSNSFWQDMQSFIETPKGVELILQSKTRSEMAQKLLEGGPLVLKSLSSSELFDFIESLISDKKWLVECPSETNPFKVTLSTAETSSCTKPLHRANGLTSIFMNKVSQPSLQGSSEHDSDSDKKNENIPQAGISTTMTKSKFPERTRSEILCDCQNLVDAILREHPEGYNMGAFRKLFLEKYGYHLDLQKLGYPKLASLLQIMPGVTIESTFIVPTGKVPKVSHVVANSDNESSDLPRKDDDFESTWEELGPAFTDCRSRNEDESTSSSETAEATEKRPKVCYEPVVLEDESSTESDGESCPTTQRSAEQAKPQTNKEESPLLQILDSWYGNKEDISSKNKSENSDEMNGCFENSLKVSSLTAKNEANTGSFAQKHRHQKNYSFVLDTDENDKEKLIDGILGTLKKSSKSRSISFQIHKENGGDDVSIKVLYCGVCHSDLHLLKNDWGVTDYPIVPGHEIVGVVTSVGNNVNKFKVGDQVGVGVIVGSCKSCQNCEQNLENYCPKLIYTYNGHSYDGAKTYGGYSDSIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAINRLGADAFVVSSDPAQLKLNGKLVTVGLPNNPLELPVASIVFGRKMVGGSNFGGLKETQEMLDFCGKHNITAEIELIRMDDINTAIERLEKADVRYRFVIDIGNSFK | 1311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3436313 | 3443403 | + | CmaCh02G005850.1 | Cma02g00585 | 288336 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 891 | 916 | - | - | |
Cma02g00585 | 1311 | Gene3D | - | 1162 | 1220 | - | - | |
Cma02g00585 | 1311 | CDD | LOTUS | 745 | 802 | - | - | |
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 362 | 381 | - | - | |
Cma02g00585 | 1311 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 1136 | 1274 | IPR036291 | - | |
Cma02g00585 | 1311 | Pfam | Alcohol dehydrogenase GroES-like domain | 1018 | 1130 | IPR013154 | - | |
Cma02g00585 | 1311 | Gene3D | - | 50 | 199 | - | - | |
Cma02g00585 | 1311 | ProSiteProfiles | OST-type HTH domain profile. | 744 | 820 | IPR025605 | - | |
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 463 | 483 | - | - | |
Cma02g00585 | 1311 | PANTHER | LIMKAIN B LKAP | 16 | 949 | IPR024768 | GO:0005777|GO:0010468|GO:1903231 | |
Cma02g00585 | 1311 | Gene3D | - | 999 | 1161 | - | - | |
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 484 | 505 | - | - | |
Cma02g00585 | 1311 | ProSiteProfiles | OST-type HTH domain profile. | 261 | 333 | IPR025605 | - | |
Cma02g00585 | 1311 | CDD | CAD1 | 1016 | 1305 | - | - | |
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 512 | 526 | - | - | |
Cma02g00585 | 1311 | Pfam | NYN domain | 57 | 192 | IPR021139 | GO:0004540 | |
Cma02g00585 | 1311 | CDD | LOTUS | 262 | 330 | - | - | |
Cma02g00585 | 1311 | CDD | PIN_limkain_b1_N_like | 57 | 181 | - | - | |
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 844 | 916 | - | - | |
Cma02g00585 | 1311 | SMART | PKS_ER_names_mod | 993 | 1304 | IPR020843 | GO:0016491 | |
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 463 | 534 | - | - | |
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 703 | 733 | - | - | |
Cma02g00585 | 1311 | Gene3D | - | 263 | 332 | IPR041966 | - | |
Cma02g00585 | 1311 | Gene3D | - | 747 | 808 | IPR041966 | - | |
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 849 | 879 | - | - | |
Cma02g00585 | 1311 | PANTHER | EMB|CAB71880.1 | 16 | 949 | - | - | |
Cma02g00585 | 1311 | Pfam | OST-HTH/LOTUS domain | 265 | 329 | IPR025605 | - | |
Cma02g00585 | 1311 | Pfam | OST-HTH/LOTUS domain | 752 | 804 | IPR025605 | - | |
Cma02g00585 | 1311 | MobiDBLite | consensus disorder prediction | 362 | 394 | - | - | |
Cma02g00585 | 1311 | Gene3D | - | 1221 | 1275 | - | - | |
Cma02g00585 | 1311 | SUPERFAMILY | GroES-like | 1014 | 1165 | IPR011032 | - | |
Cma02g00585 | 1311 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 1051 | 1065 | IPR002328 | GO:0008270|GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g00585 | Cma-Chr2:3436313 | Cma20g01081 | Cma-Chr20:8304259 | 2.61E-171 | dispersed | |
Cma01g01986 | Cma-Chr1:12775567 | Cma02g00585 | Cma-Chr2:3436313 | 9.41E-112 | transposed | |
Cma03g00852 | Cma-Chr3:6370865 | Cma02g00585 | Cma-Chr2:3436313 | 1.65E-124 | transposed | |
Cma02g00585 | Cma-Chr2:3436313 | Cma20g01079 | Cma-Chr20:8289789 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g00585 | - | - | cpep:111796232 | 1807.34 |