Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00643 ATGACTGAAAATGTGGCGTCGCCTCCGTTGAAGCTTTACTCGTACTGGCGAAGCTCTTGCTCTCAACGTGTTCGAATTGCCCTAAACTTGAAAGGGCTAAATTTTGAGTACAAAGCAGTTAACCTACTGAAGGGAGAGCAATTCACTCCCGAATATGAAAAAATCAATCCCATCGGTTATGTACCTACTCTCGTGGATGGGGATATCGTTATTGCCGACTCTTTTGCTATATTAATGTATTTAGAGGAGAAGTATCCTCAGCATCCTCTGTTGCCAAGTGATCTGAGTAAAAGAGCTGTTAATTATCAGGCTGCAAACATTGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGTTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGAGGAAAAACTTCATTGGGTTCAACGTGTCATTGAAAAAGGCTTTGCAGCACTTGAAAAGCTGCTAAAAGCTCATGCTGGAAAATTTGCTACTGGAGATGAAATCTTTCTGGCGGACGTGTTTTTGGCTCCTCAAATTCATGGCGCCATTAATAGATTCAGTGTTGACATGTCCAAATTTCCACTTTTATCCAGGTTGAATGATGAATACAATGCCATAGCAGCATTTCAAGATGCAGAGCCATCAAAGCAGCCTGATGCTCCTCAAAGCTCTAGCTAA 669 41.41 MTENVASPPLKLYSYWRSSCSQRVRIALNLKGLNFEYKAVNLLKGEQFTPEYEKINPIGYVPTLVDGDIVIADSFAILMYLEEKYPQHPLLPSDLSKRAVNYQAANIVSSSIQPLQNLVVLKYIEEKSGPEEKLHWVQRVIEKGFAALEKLLKAHAGKFATGDEIFLADVFLAPQIHGAINRFSVDMSKFPLLSRLNDEYNAIAAFQDAEPSKQPDAPQSSS 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3895323 3899120 + CmaCh02G006430.1 Cma02g00643 288394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00643 222 SFLD Glutathione Transferase (cytosolic) 10 195 IPR040079 -
Cma02g00643 222 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 6 218 - -
Cma02g00643 222 SUPERFAMILY Thioredoxin-like 7 92 IPR036249 -
Cma02g00643 222 Gene3D Glutaredoxin 9 92 - -
Cma02g00643 222 CDD GST_N_Zeta 10 82 IPR034333 -
Cma02g00643 222 SUPERFAMILY GST C-terminal domain-like 89 218 IPR036282 -
Cma02g00643 222 TIGRFAM maiA: maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cma02g00643 222 Pfam Glutathione S-transferase, N-terminal domain 12 88 IPR004045 -
Cma02g00643 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Cma02g00643 222 CDD GST_C_Zeta 97 214 IPR034330 -
Cma02g00643 222 Pfam Glutathione S-transferase, C-terminal domain 123 202 IPR004046 -
Cma02g00643 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Cma02g00643 222 SFLD Main (cytGST) 10 195 - -
Cma02g00643 222 Gene3D - 93 220 - -
Cma02g00643 222 PANTHER MALEYLACETOACETATE ISOMERASE 6 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00643 Cma-Chr2:3895323 Cma06g01135 Cma-Chr6:7652425 1.84E-91 dispersed
Cma17g01106 Cma-Chr17:7765553 Cma02g00643 Cma-Chr2:3895323 6.50E-11 dispersed
Cma02g00641 Cma-Chr2:3887013 Cma02g00643 Cma-Chr2:3895323 3.15E-112 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00643 K01800 - csv:101213302 369.777