Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g00643 | ATGACTGAAAATGTGGCGTCGCCTCCGTTGAAGCTTTACTCGTACTGGCGAAGCTCTTGCTCTCAACGTGTTCGAATTGCCCTAAACTTGAAAGGGCTAAATTTTGAGTACAAAGCAGTTAACCTACTGAAGGGAGAGCAATTCACTCCCGAATATGAAAAAATCAATCCCATCGGTTATGTACCTACTCTCGTGGATGGGGATATCGTTATTGCCGACTCTTTTGCTATATTAATGTATTTAGAGGAGAAGTATCCTCAGCATCCTCTGTTGCCAAGTGATCTGAGTAAAAGAGCTGTTAATTATCAGGCTGCAAACATTGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGTTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGAGGAAAAACTTCATTGGGTTCAACGTGTCATTGAAAAAGGCTTTGCAGCACTTGAAAAGCTGCTAAAAGCTCATGCTGGAAAATTTGCTACTGGAGATGAAATCTTTCTGGCGGACGTGTTTTTGGCTCCTCAAATTCATGGCGCCATTAATAGATTCAGTGTTGACATGTCCAAATTTCCACTTTTATCCAGGTTGAATGATGAATACAATGCCATAGCAGCATTTCAAGATGCAGAGCCATCAAAGCAGCCTGATGCTCCTCAAAGCTCTAGCTAA | 669 | 41.41 | MTENVASPPLKLYSYWRSSCSQRVRIALNLKGLNFEYKAVNLLKGEQFTPEYEKINPIGYVPTLVDGDIVIADSFAILMYLEEKYPQHPLLPSDLSKRAVNYQAANIVSSSIQPLQNLVVLKYIEEKSGPEEKLHWVQRVIEKGFAALEKLLKAHAGKFATGDEIFLADVFLAPQIHGAINRFSVDMSKFPLLSRLNDEYNAIAAFQDAEPSKQPDAPQSSS | 222 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3895323 | 3899120 | + | CmaCh02G006430.1 | Cma02g00643 | 288394 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g00643 | 222 | SFLD | Glutathione Transferase (cytosolic) | 10 | 195 | IPR040079 | - | |
Cma02g00643 | 222 | PANTHER | GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 | 6 | 218 | - | - | |
Cma02g00643 | 222 | SUPERFAMILY | Thioredoxin-like | 7 | 92 | IPR036249 | - | |
Cma02g00643 | 222 | Gene3D | Glutaredoxin | 9 | 92 | - | - | |
Cma02g00643 | 222 | CDD | GST_N_Zeta | 10 | 82 | IPR034333 | - | |
Cma02g00643 | 222 | SUPERFAMILY | GST C-terminal domain-like | 89 | 218 | IPR036282 | - | |
Cma02g00643 | 222 | TIGRFAM | maiA: maleylacetoacetate isomerase | 11 | 217 | IPR005955 | GO:0003824|GO:0005737|GO:0009072 | |
Cma02g00643 | 222 | Pfam | Glutathione S-transferase, N-terminal domain | 12 | 88 | IPR004045 | - | |
Cma02g00643 | 222 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 94 | 219 | IPR010987 | - | |
Cma02g00643 | 222 | CDD | GST_C_Zeta | 97 | 214 | IPR034330 | - | |
Cma02g00643 | 222 | Pfam | Glutathione S-transferase, C-terminal domain | 123 | 202 | IPR004046 | - | |
Cma02g00643 | 222 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 8 | 89 | IPR004045 | - | |
Cma02g00643 | 222 | SFLD | Main (cytGST) | 10 | 195 | - | - | |
Cma02g00643 | 222 | Gene3D | - | 93 | 220 | - | - | |
Cma02g00643 | 222 | PANTHER | MALEYLACETOACETATE ISOMERASE | 6 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g00643 | Cma-Chr2:3895323 | Cma06g01135 | Cma-Chr6:7652425 | 1.84E-91 | dispersed | |
Cma17g01106 | Cma-Chr17:7765553 | Cma02g00643 | Cma-Chr2:3895323 | 6.50E-11 | dispersed | |
Cma02g00641 | Cma-Chr2:3887013 | Cma02g00643 | Cma-Chr2:3895323 | 3.15E-112 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g00643 | K01800 | - | csv:101213302 | 369.777 |