Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00652 ATGGCGAACAGGCTTATGTTTGAGAACTCGTGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCGTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTTCCTTCGAAGCTGAATTAGCTGGTGTCATTCCGGTTGTTAAAACATCCATTGACGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTCCTTGTACCCCACACCACTACTGACCAAGAACTTCAGCACTTGAGAAACAGTCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTGTTTAGGCAGACAGTTGCTGGTAATGTTCTCGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCTATTGAAGATTTGGACGAACTATCGACTCTTCTTCAGGTCCCATTGGTTGCTGGAACTGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGGTTGATTGTCAATGACTGGACTGCGTTCTGTGGTTCAGACACAACTGCCACAGAATTATCGGTGGTCGAAAGCGTTTTCAAATTGAGAGAGGCTCAGCCAAGTTCCATTGTTGACGAGATGAGGAAGTCGCTGATAGACAGTTATGTGTGA 738 45.53 MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3950433 3953038 - CmaCh02G006520.1 Cma02g00652 288403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00652 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 - -
Cma02g00652 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Cma02g00652 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Cma02g00652 245 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 224 IPR002769 GO:0042256|GO:0043022
Cma02g00652 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Cma02g00652 245 CDD IF6 4 223 IPR002769 GO:0042256|GO:0043022
Cma02g00652 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Cma02g00652 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 IPR002769 GO:0042256|GO:0043022
Cma02g00652 245 Gene3D - 1 225 - -
Cma02g00652 245 SUPERFAMILY Pentein 1 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00652 Cma-Chr2:3950433 Cma20g01047 Cma-Chr20:7785542 8.37E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00652 K03264 - cit:102614879 459.144