Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g00652 | ATGGCGAACAGGCTTATGTTTGAGAACTCGTGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCGTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTTCCTTCGAAGCTGAATTAGCTGGTGTCATTCCGGTTGTTAAAACATCCATTGACGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTCCTTGTACCCCACACCACTACTGACCAAGAACTTCAGCACTTGAGAAACAGTCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTGTTTAGGCAGACAGTTGCTGGTAATGTTCTCGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCTATTGAAGATTTGGACGAACTATCGACTCTTCTTCAGGTCCCATTGGTTGCTGGAACTGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGGTTGATTGTCAATGACTGGACTGCGTTCTGTGGTTCAGACACAACTGCCACAGAATTATCGGTGGTCGAAAGCGTTTTCAAATTGAGAGAGGCTCAGCCAAGTTCCATTGTTGACGAGATGAGGAAGTCGCTGATAGACAGTTATGTGTGA | 738 | 45.53 | MANRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSYV | 245 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3950433 | 3953038 | - | CmaCh02G006520.1 | Cma02g00652 | 288403 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g00652 | 245 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 1 | 245 | - | - | |
Cma02g00652 | 245 | PIRSF | Transl_init_IF-6 | 1 | 226 | IPR002769 | GO:0042256|GO:0043022 | |
Cma02g00652 | 245 | Hamap | Translation initiation factor 6 [eif6]. | 1 | 245 | IPR002769 | GO:0042256|GO:0043022 | |
Cma02g00652 | 245 | TIGRFAM | eIF-6: putative translation initiation factor eIF-6 | 4 | 224 | IPR002769 | GO:0042256|GO:0043022 | |
Cma02g00652 | 245 | SMART | eIF6neu2 | 3 | 204 | IPR002769 | GO:0042256|GO:0043022 | |
Cma02g00652 | 245 | CDD | IF6 | 4 | 223 | IPR002769 | GO:0042256|GO:0043022 | |
Cma02g00652 | 245 | Pfam | eIF-6 family | 4 | 203 | IPR002769 | GO:0042256|GO:0043022 | |
Cma02g00652 | 245 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 1 | 245 | IPR002769 | GO:0042256|GO:0043022 | |
Cma02g00652 | 245 | Gene3D | - | 1 | 225 | - | - | |
Cma02g00652 | 245 | SUPERFAMILY | Pentein | 1 | 224 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g00652 | Cma-Chr2:3950433 | Cma20g01047 | Cma-Chr20:7785542 | 8.37E-179 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g00652 | K03264 | - | cit:102614879 | 459.144 |