Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00675 ATGGCTTCAATGGCTTCTTTCGCCCTCTTCCTCCTCTTCCATCTTCACATGGTCACGGCGGCTCTCGGGGTTCAACCGGTGATTACCGCCGCCTCTATGGTGAGTCGTGCACCGCCGCCGCCGGCCTCTCTATTGTCCCACTCCTTTTATCGTCGGACATGTCCAGATGCTGAGGGCATCATTCATCGAAAAGTGCAAGCTTGGATCAACAAGGATTTCACGTTGGCTGCTGCCCTCATTCGTTTGCATTTTCACGATTGTGCAGTTAGGGGATGCGATGCGTCGATTCTACTGAACTATCGAAGAAGCGAGAGAAGAGCCTTAGCCAGCAAAACCCTCAGGGGGTTCCGAGTAATCGACGACATCAAGGCAGAGCTCGAGAGAAAGTGCCCTAGAACCGTCTCCTGCTCCGACATTCTCACCGCCGCCGCCAGAGACGCCACCATTCTCGCCGGAGGTCCCTTCTGGGAGGTTCCATTTGGCCGTAAAGACGGAAGAATCACCATCGCTGCCGAAGCAGAACGTGTCCCGCAGGGTCGCGAAAACGTCACCGCTTTGATCGACTATTTCCGACACCTAGGGCTCGACGTCCTCGATTTGGTCGCCCTCTCCGGTGCCCACACCATTGGCCGAGCCGCCTGCCACACCTTCAATGATAGGCTATACAACTTCAACAGGACCCGAAAACCCGACCCGAATCTGAAACCTCCATTTCTGAATTTACTTCGAAGGCAGTGTAAGAAGGATATGGATCTCGTTTTTCTCGACGCGACGACTCCGAAAATGTTCGATACTGCTTACTTCAAGAATCTTCAGAAGAAATTAGGGCTTCTTACGACGGATCAAGCGCTGCAATCGGATGAAAGAACTTCTTCGTTTGTTGATTTGATGGCAAATCAACCGTTTCTTTTTGAAAGCCAATTTTCGGCGTCGATGGTGAAATTGGGGAATGTTGGAGTTCTGGTGAGGAAAAATGAAGGCGAAATCCGGGTCAATTGCAATTTCATTAACCGCAGAAGAAAGTGA 1026 51.36 MASMASFALFLLFHLHMVTAALGVQPVITAASMVSRAPPPPASLLSHSFYRRTCPDAEGIIHRKVQAWINKDFTLAAALIRLHFHDCAVRGCDASILLNYRRSERRALASKTLRGFRVIDDIKAELERKCPRTVSCSDILTAAARDATILAGGPFWEVPFGRKDGRITIAAEAERVPQGRENVTALIDYFRHLGLDVLDLVALSGAHTIGRAACHTFNDRLYNFNRTRKPDPNLKPPFLNLLRRQCKKDMDLVFLDATTPKMFDTAYFKNLQKKLGLLTTDQALQSDERTSSFVDLMANQPFLFESQFSASMVKLGNVGVLVRKNEGEIRVNCNFINRRRK 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4138381 4140119 - CmaCh02G006750.1 Cma02g00675 288426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00675 341 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
Cma02g00675 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Cma02g00675 341 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 Gene3D - 48 337 - -
Cma02g00675 341 PANTHER PEROXIDASE 25-RELATED 26 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 SUPERFAMILY Heme-dependent peroxidases 45 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 Gene3D Peroxidase, domain 2 177 315 - -
Cma02g00675 341 CDD secretory_peroxidase 45 336 IPR033905 GO:0004601|GO:0042744
Cma02g00675 341 ProSiteProfiles Plant heme peroxidase family profile. 44 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 Pfam Peroxidase 63 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PANTHER PEROXIDASE 26 336 - -
Cma02g00675 341 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g00675 341 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00675 Cma-Chr2:4138381 Cma18g00288 Cma-Chr18:1529480 1.13E-130 dispersed
Cma02g00675 Cma-Chr2:4138381 Cma16g00634 Cma-Chr16:3271830 1.27E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00675 K00430 - csv:101204209 572.778