Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00696 ATGCAAGATCCAGCGTCTTCAAACCCTATCCACACTCCCAATTCCAATCAAATTCCTCCCTTCGATGTTGCACCGCCGCCGAAGACTCATAAACCGCCGCCGGTGGTGAACGCGATGGCTTCCTCTTCCATGTTTGCCAATGCGAATGCTGGTAATGCCTCGTTTGTGCCTAGAGGTGGTTCACATCATCGGAGGGCTCATTCGGAAGTTAGCTTCCGATTGACGGAGGACATTATGGATCTCTCCGGCTCTGATCCGTTCAACGGCGGTTCGTCAACGGCTAGTCTGGAGGAGATCGGATCGGAGGATGATCTGTTTTCGACCTACATTGATGTGAAGAAGCTTGGAGGTAATGGAGGAGGGAATTTCGTGGATCAAAATGCCAATGGCGGAAGTGAAGGCGCCGGTGGTAGTGAGGGGGAGAAGACTCCGAAGCCAAGGCATCGACATAGCTTATCGGTGGATGGAACGACATCGTCATCGAGTATGTTTGGGGAGGTTATGGAAGCGAAGAAAGCTATGCCTCCTGATAAATTGGCTGAGCTTTGGAGCAGTGACCCCAAACGCGCCAAGAGGATATTAGCAAATCGACAGTCTGCTGCTCGCTCAAAAGAGAGGAAGGCACGGTATATACAAGAGTTGGAGCGGAAGGTGCAGACCCTTCAAACAGAAGCAACTACTCTAGCAGCCCAATTGACTTTGTTCCAGCGAGACACAAGGGGTCTCAGTAACGAGAATACAGAGCTTAAGCTTCGGTTACAGGCTATGGAGCAACAAGCTCAATTGCGTGATGCTCTAAACGATGCATTAAAGAAGGAAGTCGAGAGGCTTAAATTCGCTACCGGGGAAATGATGAGCCCTTCCGAGTCTTTTAACTTGGGAATGCATCACATGGCATATGCCCCATCGTCTTTCGTTCAACTTTCACAGCAACCAGCAGGTCCTCAGAATATGCAAATGCCACCATATAGCCATTCCCCATCTAACATGTCTAGCCACCCTATGCATCCATCAGATTCTCATTCTCTCTCGGAGGTTCTGCAGAGCGACCCTCTCGGCCGATTGCAGGGTCTAGACATCAGTAGTAAAGGATCGTCACTAGTGAAATCTGAGGTCCCCTCAATCTCTGCAAGTGAGAGCAGTACAACTTTTTGA 1155 49.78 MQDPASSNPIHTPNSNQIPPFDVAPPPKTHKPPPVVNAMASSSMFANANAGNASFVPRGGSHHRRAHSEVSFRLTEDIMDLSGSDPFNGGSSTASLEEIGSEDDLFSTYIDVKKLGGNGGGNFVDQNANGGSEGAGGSEGEKTPKPRHRHSLSVDGTTSSSSMFGEVMEAKKAMPPDKLAELWSSDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLAAQLTLFQRDTRGLSNENTELKLRLQAMEQQAQLRDALNDALKKEVERLKFATGEMMSPSESFNLGMHHMAYAPSSFVQLSQQPAGPQNMQMPPYSHSPSNMSSHPMHPSDSHSLSEVLQSDPLGRLQGLDISSKGSSLVKSEVPSISASESSTTF 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4250304 4252691 + CmaCh02G006960.1 Cma02g00696 288447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00696 384 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 249 IPR004827 GO:0003700|GO:0006355
Cma02g00696 384 CDD bZIP_plant_RF2 189 238 IPR044759 GO:0003700|GO:0006355
Cma02g00696 384 MobiDBLite consensus disorder prediction 1 37 - -
Cma02g00696 384 Coils Coil 239 259 - -
Cma02g00696 384 MobiDBLite consensus disorder prediction 308 384 - -
Cma02g00696 384 MobiDBLite consensus disorder prediction 1 18 - -
Cma02g00696 384 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 4 381 - -
Cma02g00696 384 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Cma02g00696 384 Pfam bZIP transcription factor 188 236 IPR004827 GO:0003700|GO:0006355
Cma02g00696 384 MobiDBLite consensus disorder prediction 308 349 - -
Cma02g00696 384 MobiDBLite consensus disorder prediction 19 33 - -
Cma02g00696 384 Gene3D - 187 240 - -
Cma02g00696 384 MobiDBLite consensus disorder prediction 121 161 - -
Cma02g00696 384 SUPERFAMILY Leucine zipper domain 188 242 IPR046347 GO:0003700|GO:0006355
Cma02g00696 384 MobiDBLite consensus disorder prediction 359 384 - -
Cma02g00696 384 PANTHER ATBZIP TRANSCRIPTION FACTOR 4 381 - -
Cma02g00696 384 Coils Coil 204 231 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00732 Cma02g00696 CCT
Cma02g00696 Cma20g00307 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00732 Cma-Chr1:3846794 Cma02g00696 Cma-Chr2:4250304 2.37E-151 dispersed
Cma02g00696 Cma-Chr2:4250304 Cma04g00106 Cma-Chr4:521220 1.52E-112 dispersed
Cma02g00696 Cma-Chr2:4250304 Cma20g00307 Cma-Chr20:1509757 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
34464 PF00170 bZIP_1 4.50E-08 CL0018 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00696 - - csv:101205663 561.992