Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00698 ATGCTTAGGATTGACTATTCAAGGCTCTTTTGGTTTATCCCCCTCCTCCTCCTCCGACGCCACGGCGGCCGTCGATTTGATTCTTATTGTTTTCTTGTTCCCCTGTTTTTCTGTTCTTATCTCTCTATTAAGCCCTTGATTTGTTCGTCAATCATGTTCAAGAATTCCAAATCGGAATATGGGTATGTTGAGACCGATCCGACTAGTCGTTACGGCCGTTTTGAAGAAGTGTTGGGAAAAGGGGCCATGAAGACAGTGTACAAAGCCATTGATGAGTTTCTAGGAATAGAGGTGGCATGGAGTCGGGTGAAACTCAACGAGGTTCTCCGATCACCGGAGGATTTGCAGCGGTTGTATTCCGAGGTTCACTTACTTAGCACGCTTAAGCATGAATCCATCATGCAGTTCTACACTTCATGGATTGATGTTGATCACAAAACCTTTAACTTTATTACCGAACTCTTTACTTCTGGAACGCTCAGAGAATATGGGAAGAGATATAGCCAAGTTGATATCAGAGCTATTAAGAGCTGGGCGCGCCAGATCCTGTTGGGGCTCGTTTATTTGCACGAGCACGATCCTCCGATAATACACCGAGATTTAAAGTGTGATAATATCTTTGTCAATGGCCATCTTGGGCAAGTCAAGATTGGTGACTTGGGGCTTGCTGCTATACTCCATGGTGCCAAATCTGCTCATAGTGTTATAGGCACGCCAGAGTTTATGGCACCAGAATTATACGAGGAGGATTACAATGAGCTAGTTGATGTCTACTCATTTGGCATGTGTGTTCTTGAGATGCTCACTGCTGAGTATCCATATAGCGAGTGTTCTAATCCCGCACAGATCTACAAGAAAGTCACGTCGGGGAAGCTGCCAGCAGCATTGTACAAGATTCAAGATGTCGAGGCGGAGAGATTCATCAAGAAATGCTTGGTACCGGTATCGATGAGGGCGTCTGCCAAGGAGCTGTTGGCTGATCCTTTTCTCATGGTTGATGGAGATAGACCTTCATCAAAAGAGAGGAAGCAAACCCAGAAGCCATTTCTAAATGCTAAAGAGATGGAGAAATTACACTTGGGTGACGGTTTAAGCAGGACGAAGATGACGATCACGGGGAAGCTGAACCACGAAGACGATACCCTCTTTCTCAGAGTTCAAACTGCAGATAAAGATGGCTCGCTTAGGAACATATATTTCCCGTTCGACATAGTGAACGACACGGCATTGGACGTGGCGATCGAGATGGTGAAAGAGTTAGAGATCTCTGATTGGGAGCCTTTTGAAATAGCAGACATGATAGAAGGAGAGATATCAGCTCTGGTTCCAAACTGGAATAGAAGTGAGTTGTCCAACCATAGTCTCAGCTTCAGCTATGCAGAAGACGACGTCGACGACATTTCGTGTCATCGTAATTTCCGCTCTATCTCCTCGTCGTCCCAAGCTACATCGTTAGGCCTCATCGGCTCCCCGAGCACAAACCGAAACATACCAAATGGTTTTAGTTGGTTCCCAGATGACACCCTTGATGATAGCAGTTCACAATGCTCGTCGACATCGGGAACGTACTCCAACTTCAATTACATCAGCAACGACGAGTACGAAACCAGTTCGGTTCGAACAGATCAACATAAGATTCACAACTCCTCTAGATTTTGTCCCATTGAGAACCGCAAAAACAAGGATTTCGTGGGTGGAGTTTTGTACAAAACGAGCCAATGTGCAGTCGGGGCGTCTCAAGGAGCAGCGTCTAGTCGGAAGGACAAGAGGGGAGGAATGGATGGGCGTAGATTAACAAGAAACAGGTCACTAGTTGATGTACACAGCCAATTGTTGCATCTTTCGTTGGTCGAGGAAGTGAATAGAAGACGGTTATTCAAGACGGTCGGAGCAGTTGAAAGCATCGGTTTTCAATCGCCTTGTGAGGTTTCTTCGAGCAGCAAAAGGGTGTCGAGTAGGCAAGCGATCGGGAACCGAAGTAGCAATGTAACGAGAACGAGAAGAAATGGCGATACTAGGGAAGATGTTTGGAAGAGAACATGA 2043 45.96 MLRIDYSRLFWFIPLLLLRRHGGRRFDSYCFLVPLFFCSYLSIKPLICSSIMFKNSKSEYGYVETDPTSRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSRVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMQFYTSWIDVDHKTFNFITELFTSGTLREYGKRYSQVDIRAIKSWARQILLGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGAKSAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMLTAEYPYSECSNPAQIYKKVTSGKLPAALYKIQDVEAERFIKKCLVPVSMRASAKELLADPFLMVDGDRPSSKERKQTQKPFLNAKEMEKLHLGDGLSRTKMTITGKLNHEDDTLFLRVQTADKDGSLRNIYFPFDIVNDTALDVAIEMVKELEISDWEPFEIADMIEGEISALVPNWNRSELSNHSLSFSYAEDDVDDISCHRNFRSISSSSQATSLGLIGSPSTNRNIPNGFSWFPDDTLDDSSSQCSSTSGTYSNFNYISNDEYETSSVRTDQHKIHNSSRFCPIENRKNKDFVGGVLYKTSQCAVGASQGAASSRKDKRGGMDGRRLTRNRSLVDVHSQLLHLSLVEEVNRRRLFKTVGAVESIGFQSPCEVSSSSKRVSSRQAIGNRSSNVTRTRRNGDTREDVWKRT 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4262282 4265704 + CmaCh02G006980.1 Cma02g00698 288449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00698 680 SUPERFAMILY Protein kinase-like (PK-like) 74 331 IPR011009 -
Cma02g00698 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Cma02g00698 680 SMART serkin_6 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00698 680 Gene3D Phosphorylase Kinase; domain 1 56 153 - -
Cma02g00698 680 Gene3D Transferase(Phosphotransferase) domain 1 155 334 - -
Cma02g00698 680 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 54 667 - -
Cma02g00698 680 MobiDBLite consensus disorder prediction 666 680 - -
Cma02g00698 680 MobiDBLite consensus disorder prediction 647 680 - -
Cma02g00698 680 MobiDBLite consensus disorder prediction 647 665 - -
Cma02g00698 680 ProSiteProfiles Protein kinase domain profile. 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00698 680 CDD STKc_WNK 70 330 - -
Cma02g00698 680 Pfam Protein kinase domain 75 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00698 680 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 54 667 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00698 Cma20g00310 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00698 Cma-Chr2:4262282 Cma03g00297 Cma-Chr3:3865243 0 dispersed
Cma02g00698 Cma-Chr2:4262282 Cma20g00310 Cma-Chr20:1534263 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68336 PF00069 Pkinase 3.70E-46 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00698 K08867 - csv:101203757 1036.94