Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00704 ATGCCGGAGATCGAACCCTACTCCGCCGGCAATAATGCCCTGTTTGGCAAGTACGAGCTCGGAAAGCTCCTCGGCTGCGGTGCCTTCGCCAAGGTCTACCATGCCCGCGACCTTCGCTCCGGCCAGAGCGTCGCCGTCAAAGTCATTAATAAGAAGAAGATCTATGGCACAACGCTAATGTCTAACATCAAGCGGGAGATCGCCATCATGCGCCGTCTCCGCCATCCACACATCGTCAAACTCCATGAGGTTCTCGCTACCAAATCCAAGATCTACTTTGTTATGGAATTCGTCAAAGGAGGCGAGCTCTTTGCCAAGGTCGCCAAGGGCCGATTCAGCGAGGATTTGAGCAGGAAGTTCTTCCAGCAATTGATTTCCGCCGTTGGATTCTGTCACGCGCGTGGGATCTACCACCGCGATCTGAAGCCGGAGAATCTCCTCGTCGACGAGAATGGGAATCTCAAGGTCTCGGACTTCGGACTCAGTGCGTTAACGGACCAGATCCGCTCTGATGGCCTTTTGCACACACTCTGTGGAACTCCGGCGTATGTCGCGCCGGAGATCTTGTCGAAGAAGGGATACGACGGTGCGAAAGTTGATGTGTGGTCCTGTGGTGTGATTCTTTTCGTGTTGAGTGCTGGTTACCTTCCGTTCAATGATCCGAATCTTATGGCCATGTACAAGAAGATTTACAAGGGAGAATATCGGTGCCCTAAATGGATGTCGCCGGACCTCAAGAGATTTCTATCGCGACTTCTGGATACAAATCCTCAAACGAGAATCACCGTCGATGAGATTCTCAGCGATCCGTGGTTCAAAAAAGGACCAATTAAGGAGATCAATTTCTACGATGATTACGAGGTGAAATATGAAGATAAGGACGAATCTGAATCGACGAATTTGAACGCATTCGACCTTATATCATTCTCATCTGGATTAGATCTATCCGGTTTATTCGACAATTCGCACAACACGGAGGCGGACAGTGAGCGATTCGTATCAGCAGAGTCTCCAGAGAAGATCGTGGAGAAAGTCGAGGAACTCGCTAGGGCAGAGAATTTGAAGGTGAAGAAACAAAAGGAATTTGGAGTTGAATTGGATGGGCAGAGTCGTAATTTATCAATCAGAATCGAAATCTTCCGGTTAACCGACGGATTGGTAGTGGTGGAAGCGAGAAGAAGAAGTGGAGATGCAGAATCGTGTAAGGAATTGTTGAAGAAGAAGCTCAAATGTCACCTCACCGGCAACGAAGCGTCGACGTCGACGTCAACATCCCAACAAGATTCCGGCGACCAGAACCAGTGA 1305 49.43 MPEIEPYSAGNNALFGKYELGKLLGCGAFAKVYHARDLRSGQSVAVKVINKKKIYGTTLMSNIKREIAIMRRLRHPHIVKLHEVLATKSKIYFVMEFVKGGELFAKVAKGRFSEDLSRKFFQQLISAVGFCHARGIYHRDLKPENLLVDENGNLKVSDFGLSALTDQIRSDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFVLSAGYLPFNDPNLMAMYKKIYKGEYRCPKWMSPDLKRFLSRLLDTNPQTRITVDEILSDPWFKKGPIKEINFYDDYEVKYEDKDESESTNLNAFDLISFSSGLDLSGLFDNSHNTEADSERFVSAESPEKIVEKVEELARAENLKVKKQKEFGVELDGQSRNLSIRIEIFRLTDGLVVVEARRRSGDAESCKELLKKKLKCHLTGNEASTSTSTSQQDSGDQNQ 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4273796 4275100 + CmaCh02G007040.1 Cma02g00704 288455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00704 434 Pfam NAF domain 299 358 IPR004041 GO:0007165
Cma02g00704 434 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00704 434 SUPERFAMILY Protein kinase-like (PK-like) 15 282 IPR011009 -
Cma02g00704 434 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Cma02g00704 434 Gene3D Transferase(Phosphotransferase) domain 1 100 276 - -
Cma02g00704 434 Gene3D Phosphorylase Kinase; domain 1 7 99 - -
Cma02g00704 434 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00704 434 PANTHER - 8 423 - -
Cma02g00704 434 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 8 423 - -
Cma02g00704 434 Coils Coil 341 361 - -
Cma02g00704 434 CDD CIPK_C 302 399 - -
Cma02g00704 434 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00704 434 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Cma02g00704 434 MobiDBLite consensus disorder prediction 414 434 - -
Cma02g00704 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Cma02g00704 434 Gene3D Kinase associated domain 1, KA1 297 415 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00704 Cma20g00311 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00704 Cma-Chr2:4273796 Cma07g01228 Cma-Chr7:6767854 0 dispersed
Cma14g01768 Cma-Chr14:12842347 Cma02g00704 Cma-Chr2:4273796 2.01E-125 dispersed
Cma02g00704 Cma-Chr2:4273796 Cma20g00311 Cma-Chr20:1543218 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68337 PF00069 Pkinase 1.80E-72 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00704 - K12761 csv:101204001 697.967