Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g00707 | ATGGGCGCTTCTCTTCTCCGTCTCCACTTTCACGACTGTTTTGTTAATGGTTGTGATGGATCTATTCTTCTCGAAGATACTCCTACTTTTACTGAAGAGCAAACTACAGCTCCCAATGTTAGATCCGTTAGAGGGTTCGATGTGATTGAGAGTATAAAGAAGAATGTCGAAAAAGTTTGTCCTGGTGTTGTCTCTTGTGCTGATATTTTGACTCTTTCTGCTCGGGACTCCATTGTAGCACTTGGAGGGCCGAGTTGGGAGGTGAAATTAGGAAGGAGAGATTCCCAAACAGCTAGCTTCTCTAATGTCGCTGGTGCCATTCCTCCACCAACCTCTACACTCGACAACCTTATCGATCGGTTCAACACTAAAGGCCTTTCCCCTCGAGATTTGGTTGCCTTATCTGGGGCTCACACGATCGGGCAAGCAAAATGTTTGTTTTTCAAGAACCGTATATACAACGAGACCAACATTGATGAATCTTTCGCTGAGGAGAGACAGAGGAATTGCCCAGTAAATGGAGGAGACGATAACCGTGCTCCTCTAGACTTTGAAACTCCAAATCTCTTTGACAACTACTACTACAAGAACCTTTTGGATCAAAAGGCTCTACTCCGCTCGGATCAAGTGCTGCATGATGGTGGATCCACTGATTCCTTAGTTGAACTATACAGTGACGACAGTGATGCCTTTGAAGCTGACTTTGTGACAGCTATGATCAAAATGAGCGACATTGAGCCACTCACAGGATCACAAGGCGAGATTCGAAACGTGTGCAATCTAAAATACTGGGCTCGATCCAACCAACTTCTTAGTCCATTAACCAAGTTCATGGGCTCAGTTATGGGCTCAGTTATGGGCTTACAGAAACCAAAACCAGGACCTAAAATGGCCGCTCTCAATCGGAAGCGACGAAACATTTGCATAGCCGTATTACTTTCCCTAATCGTGCTCGTAATCTTGATCCTCATTTTAGCATTTACAGTTTTCAAGCCCAAGCAGCCCACCATCACCGTCGATTCAGTTTCTTTGCTCGATCTCAACATTTCTCTGAACGCTGCGAGGTTCGGCGTCGATCTGAATTTGACTCTGATTGTGCAACTCACCGTCGAGAATCCGAATAAGGTAGCCTTCCAACACTCCGATGGCACCGCCGTCGTGAGTTACAGAGGCGAAGAAGTCGCAGAAGCGCCGATTCCGTCTGGTCGGTTGTCGCCCGACGGGACAGAGAAAATGAACCTAACGCTGACGATGATGGCGGACCGGCTACTAGCCAAGTCGGAGCTGTTCTCCGATGTGATCGCTGGTGAACTTCCGATCAGCACTTTCGCTCGGCTGGCCGGGAAAATGACGGTGATCGGTGTTTTCAAGATTCGTGTTGTGGCATTGTCGTCTTGTGATCTCACCATCGACATTAGAAACAGAAGCGTTGAGGATCAGCGATGCGAATATCGGACTAAGCTCTAA | 1467 | 47.17 | MGASLLRLHFHDCFVNGCDGSILLEDTPTFTEEQTTAPNVRSVRGFDVIESIKKNVEKVCPGVVSCADILTLSARDSIVALGGPSWEVKLGRRDSQTASFSNVAGAIPPPTSTLDNLIDRFNTKGLSPRDLVALSGAHTIGQAKCLFFKNRIYNETNIDESFAEERQRNCPVNGGDDNRAPLDFETPNLFDNYYYKNLLDQKALLRSDQVLHDGGSTDSLVELYSDDSDAFEADFVTAMIKMSDIEPLTGSQGEIRNVCNLKYWARSNQLLSPLTKFMGSVMGSVMGLQKPKPGPKMAALNRKRRNICIAVLLSLIVLVILILILAFTVFKPKQPTITVDSVSLLDLNISLNAARFGVDLNLTLIVQLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSPDGTEKMNLTLTMMADRLLAKSELFSDVIAGELPISTFARLAGKMTVIGVFKIRVVALSSCDLTIDIRNRSVEDQRCEYRTKL | 488 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4281800 | 4285568 | - | CmaCh02G007070.1 | Cma02g00707 | 288458 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g00707 | 488 | PRINTS | Haem peroxidase superfamily signature | 183 | 198 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Haem peroxidase superfamily signature | 64 | 81 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Haem peroxidase superfamily signature | 82 | 94 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Haem peroxidase superfamily signature | 2 | 16 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Haem peroxidase superfamily signature | 130 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | SUPERFAMILY | Heme-dependent peroxidases | 1 | 260 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | Pfam | Peroxidase | 1 | 227 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | Gene3D | Peroxidase, domain 2 | 108 | 242 | - | - | |
Cma02g00707 | 488 | Gene3D | - | 323 | 469 | - | - | |
Cma02g00707 | 488 | CDD | secretory_peroxidase | 1 | 260 | IPR033905 | GO:0004601|GO:0042744 | |
Cma02g00707 | 488 | ProSitePatterns | Peroxidases active site signature. | 2 | 13 | IPR019794 | GO:0004601 | |
Cma02g00707 | 488 | PRINTS | Plant peroxidase signature | 181 | 196 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Plant peroxidase signature | 197 | 214 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Plant peroxidase signature | 4 | 24 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Plant peroxidase signature | 44 | 57 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Plant peroxidase signature | 63 | 73 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Plant peroxidase signature | 129 | 141 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Plant peroxidase signature | 82 | 97 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PRINTS | Plant peroxidase signature | 237 | 250 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | Pfam | Late embryogenesis abundant protein | 368 | 458 | IPR004864 | - | |
Cma02g00707 | 488 | PANTHER | PEROXIDASE | 1 | 260 | - | - | |
Cma02g00707 | 488 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 130 | 140 | IPR019793 | - | |
Cma02g00707 | 488 | Gene3D | - | 1 | 260 | - | - | |
Cma02g00707 | 488 | SUPERFAMILY | LEA14-like | 317 | 424 | - | - | |
Cma02g00707 | 488 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 263 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma02g00707 | 488 | PANTHER | PEROXIDASE 72-RELATED | 1 | 260 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g00721 | Cma02g00707 | CCT | |
Cma02g00707 | Cma20g00313 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g00707 | Cma-Chr2:4281800 | Cma20g00314 | Cma-Chr20:1557538 | 6.74E-177 | dispersed | |
Cma03g00266 | Cma-Chr3:3677324 | Cma02g00707 | Cma-Chr2:4281800 | 1.15E-52 | dispersed | |
Cma07g01192 | Cma-Chr7:6551472 | Cma02g00707 | Cma-Chr2:4281800 | 3.61E-65 | dispersed | |
Cma17g00458 | Cma-Chr17:2749663 | Cma02g00707 | Cma-Chr2:4281800 | 8.94E-21 | dispersed | |
Cma02g00707 | Cma-Chr2:4281800 | Cma20g00313 | Cma-Chr20:1550512 | 9.09E-145 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g00707 | K00430 | - | csv:101204245 | 483.796 |