Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00735 ATGGCCGTCGCCGCCTGCTCCACCGACTTCACCCGCGACTCCGCCTGTCGCGACGGCCACGCCGCCGCCCACCTCAAGTTCATTTCCATCTTCCTCATCTTCTTCACCAGCGTCATCGGCGTCTCCTTACCAGTCCTCCTCACCCGTTTCTTCCACGGAAAACCCCTTTACGACAAAGCGATTCTAATCATCAAGTGCTTCGCCGCCGGCGTGATTCTCTCTACCTCACTCGTCCACGTCCTCCCCGACGCCTTCGACGCTCTCTCTGACTGCCAAGTGGCTTCCCAACACCCATGGCGGGATTTCCCCTTCTGCGGTCTGGTCACCATGATCGGCGCACTGCTGGCGCTTCTCGTCGACGTCACCGCCACGTCGCACGTGGAGCACAGCCACTACAATCCGGTGGAGATAGAGGAGAAACCGAGCACCGACTCTGCAGGGGATATTGGGTTTCTGGTGTCGGTGGATTCGAAATCGGAGATGGGGGATTTAGGGGGAGGGAGTTGCCACCGGCGGCGAGAAGGGGAGGAGGAATTGGTGAAATTGAAGCAGAAACTCGTGTCTCAAGTTCTTGAAATTGGGATTATTTTTCACTCTGTAATCATCGGAGTTACGATGGGAATGTCCCAAAATCAGTGCACAATTAAGCCTCTGGTGGCTGCTCTTTCATTTCATCAGATCTTTGAAGGAATGGGCCTCGGCGGCTGTATTGCTCAGGCAGGATTCAGCTTCACAACGACGTCGTATATGTGTTTCATGTTCTCAGTAACAACGCCAATGGGGATAGTATTAGGGATGGTACTGTTTTCAATAACAGGGTACGACGACAGCAGCCCCAAGGCGTTGATCATGGAGGGATTATTGGGTTCATTTTCGTCGGGGATTCTAATATACATGGCTCTGGTGGATCTAATAGCAGTAGATTTTTTCCACAACAAGATGATGAGCTCAAATCAACGGCTGAAGAGGGGTTGTTTTGTGGCGTTGTTGCTCGGGTCGGCGTCCATGTCGGTGTTAGCTTTGTGGGCGTGA 1032 53.2 MAVAACSTDFTRDSACRDGHAAAHLKFISIFLIFFTSVIGVSLPVLLTRFFHGKPLYDKAILIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASQHPWRDFPFCGLVTMIGALLALLVDVTATSHVEHSHYNPVEIEEKPSTDSAGDIGFLVSVDSKSEMGDLGGGSCHRRREGEEELVKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIKPLVAALSFHQIFEGMGLGGCIAQAGFSFTTTSYMCFMFSVTTPMGIVLGMVLFSITGYDDSSPKALIMEGLLGSFSSGILIYMALVDLIAVDFFHNKMMSSNQRLKRGCFVALLLGSASMSVLALWA 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4458402 4460121 + CmaCh02G007350.1 Cma02g00735 288486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00735 343 PANTHER ZINC/IRON TRANSPORTER 5 343 - -
Cma02g00735 343 Pfam ZIP Zinc transporter 24 340 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cma02g00735 343 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 5 343 - -
Cma02g00735 343 TIGRFAM zip: ZIP zinc/iron transport family 12 343 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00735 Cma-Chr2:4458402 Cma12g00640 Cma-Chr12:3405585 2.28E-74 dispersed
Cma09g01000 Cma-Chr9:5100852 Cma02g00735 Cma-Chr2:4458402 4.63E-11 dispersed
Cma02g00735 Cma-Chr2:4458402 Cma18g00546 Cma-Chr18:3514491 3.58E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00735 K14709 - csv:101214729 540.036