Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00802 ATGGGCAACGGGATTGGGAAGCTCGGCGTTTGCTTCACCGGAATTAGCGACGGTAGGCGGCGGCCGGATATTTCTGTTCTGTTATCGAATCCACTCGATGAAGGGCTTGGACACTCGTTCTGCTATGTCCGGCCGGATCCTTTGAGGCTGTCGTCTTCAAAAGTTCATTCCGATGAAACCACCACTTTCCGATCAATTTCCGGCGCCTCTGTAAGTGCCAATACATCGACGCCTCTTTCTACGGCTCTTGTTGATCTGTATTCGTACAATAGCATTGATCGAGCGGCGGCTTTTGAGAGTTCGACTTCTTTCGCTTCAATTCCTTTGCAGCCGATCCCTAAAAACATGATTAATTCGGGTCCGATTCCGGGTAATTTCAGTGGAATCCCTAGTTCGGGTCCTTTGGAAAGAGGGTTTTTATCGGGTCCAATTGAACGAGGGTTTATGTCGGGTCCATTGGATCGGGGGATTTTTTCGGGTCCTCTTGATAATTCTACATCTTGCGAATTTCAGAGAAGTTTCTCTCATGGTGGAGGATTTAATTCCAGATCTGGATCGAGAAAAGGCCGGCTAATTCGGATTTTGAGAAGCGTAATTTCGAAGTCGATTTATCGAGGGCAAAATTCCATTGTGGCTCCAATTAAAGCGGTAAAAGAACCCGATTGGATCGTCATGCCCGAGAAACATAATGAGAATTTGACTGTGAGTAGTTTAAATTTCAGTAGTGAGGGAAGTTTGGAAGACGATGATTCAATGGAGAGCCAAAATCTGCAGTGGGCTCAAGGAAAAGCAGGGGAAGATCGTGTTCATGTGGTGGTTTCGGAAGAACATGGTTGGGTTTTCGTCGGGATTTACGATGGATTTAACGGTCCTGATGCTCCTGATTACCTTTTATCGAATCTATACTCCTTTGTTCATAAGGAACTTAAAGGTTTGTTATGGGATGAAAAGCTCGATTCTGCCGGAGTCGCCGCTCCGGCAACTTCCCCTGTTCGATCTGAGAATCATCCTTGTCCAGAAACAAGAGATTGTTCGCAGGTTAACGCTTGTTCTCAGTGTGTTGAACAAGAGAATCATCCTTGTGCTAGTGGCGATGCGAATTCTGGATCAAATTCGAGGAGAAAAAAAGGTAAGAATTCAAGAGGAAAGTTCAAAGGAGCTTCTGAGAAATGGGAGGATAATCAGCGGAAATGGAAGTGCGAATGGGATCAGGAACGATTAGAGCTCGATCGGAGGTTAAAGGAGCAGTTGAATCGATCTGCGTCGTCGAACGGTTCGAGGTCGATTAATCATTCGGATGTTTTGAAAGCTTTGTCCCAGGCATTGAAGAAAACAGAGGAGGCCTATTTGGATATTGCAGACAAGATGCTCGATGAAAATCCTGAACTGGCTTTGATGGGTTCTTGTGTGCTCGTGATGCTTATGAAGGGAGATGATGTTTATGTGATGAACGTTGGCGATAGCCGAGCTGTTTTAGCGCAGAAGGCGGAGCCCGATTATTGGCTCGGGAAGATTCAACAGGATTTGGAGAGGATTAATGAAGAGCCAGTTCATGACATTGAAGCATTAGATGGAGATAGACAATTCACATCAGCTAACCTTGCTGCTTTTCAGCTTTCCATGGATCACAGCACCAGTGTTGATGAGGAAGTTCAGAGAATAAAAAATGAACATCCTGATGATGCTGGTGCCGTGATGAACGACCGTGTGAAAGGCTCGTTGAAGGTTACTCGGGCGTTCGGTGCTGGGTTCCTCAAACAGCCTAAATGGAACAATGCACTGTTGGAAATGTTCAGAATCAACTACGTCGGGGGATCGCCATATATCAATTGTCTACCATCTCTCTACCACCACAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCTGATGGACTCTACCAGTACTTCACGAACGAGGAAGCTGTTTCGGAAGTCGAACTTTTCATCACCTTGCAACCCGAAGGAGACCCGGCACAACATCTGGTTGAACTACTGCTGTTTCGGGCTGCAAAGAGAGCTGGTATGGATTTCCACGAGTTACTCAAAATACCACAGGGTGACCGGAGGAAGTACCACGACGATGTATCGATCATTGTAATTTCATTAGAAGGGAGGATCTGGAGATCCTGTGTATAA 2142 45.8 MGNGIGKLGVCFTGISDGRRRPDISVLLSNPLDEGLGHSFCYVRPDPLRLSSSKVHSDETTTFRSISGASVSANTSTPLSTALVDLYSYNSIDRAAAFESSTSFASIPLQPIPKNMINSGPIPGNFSGIPSSGPLERGFLSGPIERGFMSGPLDRGIFSGPLDNSTSCEFQRSFSHGGGFNSRSGSRKGRLIRILRSVISKSIYRGQNSIVAPIKAVKEPDWIVMPEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSFVHKELKGLLWDEKLDSAGVAAPATSPVRSENHPCPETRDCSQVNACSQCVEQENHPCASGDANSGSNSRRKKGKNSRGKFKGASEKWEDNQRKWKCEWDQERLELDRRLKEQLNRSASSNGSRSINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIQQDLERINEEPVHDIEALDGDRQFTSANLAAFQLSMDHSTSVDEEVQRIKNEHPDDAGAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRINYVGGSPYINCLPSLYHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVELLLFRAAKRAGMDFHELLKIPQGDRRKYHDDVSIIVISLEGRIWRSCV 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4762278 4765563 + CmaCh02G008020.1 Cma02g00802 288553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00802 713 Coils Coil 435 455 - -
Cma02g00802 713 MobiDBLite consensus disorder prediction 358 388 - -
Cma02g00802 713 SUPERFAMILY PP2C-like 263 705 IPR036457 -
Cma02g00802 713 ProSiteProfiles PPM-type phosphatase domain profile. 249 704 IPR001932 -
Cma02g00802 713 PANTHER - 12 713 - -
Cma02g00802 713 CDD PP2Cc 409 704 IPR001932 -
Cma02g00802 713 PANTHER PROTEIN PHOSPHATASE 2C 12 713 IPR015655 GO:0004722|GO:0006470
Cma02g00802 713 Pfam Protein phosphatase 2C 411 654 IPR001932 -
Cma02g00802 713 Gene3D - 226 709 IPR036457 -
Cma02g00802 713 SMART PP2C_4 250 702 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00802 Cma20g00405 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00802 Cma-Chr2:4762278 Cma16g01071 Cma-Chr16:8200291 2.12E-176 dispersed
Cma02g00802 Cma-Chr2:4762278 Cma20g00405 Cma-Chr20:1941128 0 wgd
Cma02g00802 Cma-Chr2:4762278 Cma03g00425 Cma-Chr3:4535391 0 wgd
Cma02g00802 Cma-Chr2:4762278 Cma07g00996 Cma-Chr7:5127919 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00802 - - csv:101222644 1304.66