Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00844 ATGGATTGTAGAAGACGATTTGGATTACTCTTCTGGGGTGGTTTGTTGATTTCGTTGTTTCCTTACATTTCTTGTTTGTTTAATCCGGTAGATAATTATCTCATTGACTGTGGATCTTCGGGGAATGTGTCTGTGGGTAATCGTGTTTTCATGGCCGATAATTTGGCTTCAAATTTGCTTTCCACTCCAGAAATCATTTCGGCTAATACATCTTCAGTTCCTGCCTCTTCTTCTAACGATTCATCGCTGTTCGAAACTGCTAGAATCTTTACTGGAACATCAAAATTCACGTTTCCAATAAAGAAAACCGGAAGGCATTGGATCCGCCTCTATTTCTATCCATTTGTGTTTTCTAGCTTCAATATGAGTGCTGCAAATTTCAGTGTTTCAACTCAAAACTTTGTTCTGCTGAGAGATTTGGTTATAGTGAAGGATCCCATAGTCAAAGAATTCTCTGTGGATGTAAAATCAGATACTCTTGAAGTTATCTTTGCTCCTGTTAATGGCTCCATTGCATATGTGAACGCCATTGAAGTTGTTTCTGTTCCTGACATTCTCATTGTTGATGAAGCCACTTTGTTAGAACCATCTGGTAAATTTCAAGGGCTGACTACTCTAGCATATGAGACTGTTGCTAGAGTTAATGTGGGTGGCCCAAAAGTTGCTCCTGATAAAGATCCTCTTACACGGAATTGGGTTTCTGATGGAAGCTTTCTAGTAAATAAGAATTCTGCAACAAGTTTCTCGAACATTCCCGCTGTTAAATACAGTCCTGAAGGCGCAGCGCCGGAGATTGCTCCAAATGTTGTCTATGGTACTCTCATGGAGATGAACTCGAAGGACGATCCAAACAGTAACTTCAATGTGACATGGAAGTTTAAAGTCGATCCCGAGTTTCAGTATCTTGTTCGGTTTCACTTCTGTGACATTGTGAGCAAATCTCTACACCAACTTTATTTCAATGTTTATGTCGACTCGTGGCTGGTTGTTCGGGATCTGGATCTTAGTGTTCGACTTTCTAATGCTCTGGGCACTCCATACTATATGGACTCTGTTACAGGATTGATCAAGAATGACATACTTCTTGTGAGTATTGGCCCAGCAAACTTAGCCAATGTGTATCCAAATGCCATTCTAAATGGTCTGGAAATCATGAAAATGAGCAACTCTGTTGGCAGTCTCAGCGGGGAAGACTCTGTAATTAGTTTTCCAGGCTCGACTTCTTCAAATAAGCATGTTGGCGTCATTATCGGTGTGGTTATTGGGGCATTTGTTGCAGCTATATTGGTTGGCGTTCTTTTCGTGCTGTGCAGACGAAAAAGAAAGGGAATGCATCATGCCCCGACGAAATCGTGGATTTCGATATCCACAGCTGGAGGAATGTCACACACTATGGGAAGTAAATACTCTAATGGCACGATCACAAGTGCTGCTTCCAACTACGGGTATCGAATACCTTTTGCAACAGTTCAAGAGGCTACAAATAACTTCGATGAGAGCTGGGTTATTGGTATTGGCGGGTTCGGGAAAGTATACAAGGGAGTTTTGAATGATGGCACCAAAATTGCTGCAAAGAGGGGTAATCCGCGTTCCCAACAAGGATTGGCCGAGTTTCAAACTGAAATCGAGATGCTGTCACAGTTTCGTCATCGGCATCTCGTTTCATTGATTGGTTACTGTGATGAGAGGAATGAGATGATACTGATTTATGAGTACATGGAACAAGGCACCCTGAAGAGTCATCTATATGGTTCTGATTTTCCTAGTTTGAGCTGGAAAGAGAGACTTGAGGTCTGCATTGGAGCCGCTAGGGGACTTCATTACCTCCATACTGGTTATGCCAAACCTGTTATTCATCGTGACGTGAAGTCCGCTAATATTTTACTCGACGAAAACCTCATGGCGAAGGTTGCAGACTTCGGGCTTTCGAAGACGGGTCCTGATCTAGACCAAACCCATGTCAGTACTGCTGTAAAAGGGAGTTTTGGGTACCTTGATCCTGAATATTTCAGGAGGCAACAACTGACAGAGAAATCAGATGTTTATTCATTTGGAGTTGTTTTGTTTGAAGTTCTTTGTGCAAGACCTGTCATAGATCCAACCCTTCCTAGAGAAATGGTAAACTTAGCTGAATGGGCAATGAAATGGCAGAAGAAAGGGCAGTTGGATCAAATCATTGATTCTACTCTTGTAGGTAAAATTAGAGCAACTTCTCTTAGGAAGTTTGGTGAAACTGCTGAAAAATGCTTGGCTGACTATGGAGTCGACCGGCCATCCATGGGAGACGTCTTGTGGAACTTGGAGTATGCTCTTCAGCTACAAGAAGCCATTATCGAAGTCGATCCAGAAGATAACAGTACTAATATGATCGGCGAGCTCTCTCCACAAATTAACAACTTCAGTGATATCGAAACAGGTGCCTCTGCTACACGGTTCGACGTTCCAGGCGTGGATGATCTTTCTGGAGTCTCCATGAGTAGGGTGTTCTCTCAGCTGGTGAAATCTGAGGGTCGATGA 2517 42.59 MDCRRRFGLLFWGGLLISLFPYISCLFNPVDNYLIDCGSSGNVSVGNRVFMADNLASNLLSTPEIISANTSSVPASSSNDSSLFETARIFTGTSKFTFPIKKTGRHWIRLYFYPFVFSSFNMSAANFSVSTQNFVLLRDLVIVKDPIVKEFSVDVKSDTLEVIFAPVNGSIAYVNAIEVVSVPDILIVDEATLLEPSGKFQGLTTLAYETVARVNVGGPKVAPDKDPLTRNWVSDGSFLVNKNSATSFSNIPAVKYSPEGAAPEIAPNVVYGTLMEMNSKDDPNSNFNVTWKFKVDPEFQYLVRFHFCDIVSKSLHQLYFNVYVDSWLVVRDLDLSVRLSNALGTPYYMDSVTGLIKNDILLVSIGPANLANVYPNAILNGLEIMKMSNSVGSLSGEDSVISFPGSTSSNKHVGVIIGVVIGAFVAAILVGVLFVLCRRKRKGMHHAPTKSWISISTAGGMSHTMGSKYSNGTITSAASNYGYRIPFATVQEATNNFDESWVIGIGGFGKVYKGVLNDGTKIAAKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEQGTLKSHLYGSDFPSLSWKERLEVCIGAARGLHYLHTGYAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDSTLVGKIRATSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAIIEVDPEDNSTNMIGELSPQINNFSDIETGASATRFDVPGVDDLSGVSMSRVFSQLVKSEGR 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4933801 4936317 + CmaCh02G008440.1 Cma02g00844 288595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00844 838 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Cma02g00844 838 SUPERFAMILY Protein kinase-like (PK-like) 474 768 IPR011009 -
Cma02g00844 838 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 20 830 - -
Cma02g00844 838 PANTHER OS07G0166700 PROTEIN 20 830 IPR045272 GO:0004714|GO:0006468
Cma02g00844 838 Gene3D Phosphorylase Kinase; domain 1 460 572 - -
Cma02g00844 838 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00844 838 Pfam Malectin-like domain 35 387 IPR024788 -
Cma02g00844 838 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Cma02g00844 838 CDD STKc_IRAK 503 768 - -
Cma02g00844 838 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g00844 838 Gene3D - 206 389 - -
Cma02g00844 838 Gene3D - 32 182 - -
Cma02g00844 838 Pfam Protein tyrosine and serine/threonine kinase 502 696 IPR001245 GO:0004672|GO:0006468
Cma02g00844 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00844 Cma20g00441 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00844 Cma-Chr2:4933801 Cma09g00890 Cma-Chr9:4385407 0 dispersed
Cma02g00844 Cma-Chr2:4933801 Cma20g00441 Cma-Chr20:2089714 0 wgd
Cma02g00844 Cma-Chr2:4933801 Cma04g00249 Cma-Chr4:1216602 0 wgd
Cma02g00844 Cma-Chr2:4933801 Cma04g01222 Cma-Chr4:6235585 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68347 PF12819 Malectin_like 1.10E-31 CL0202 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00844 - - csv:101218488 1419.45