Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00862 ATGCGAAACCCTAGAATGGTTGATCTGGTGTATATAGTGTATTTAGGGCACACCCATCTCGAGGATGCAACTTTGACCTCCGAATCTCATCTTCGTTTGCTTTCTAAAGTATTTGCAAGTGAAGAAGATGGTAAACGAGCCATGTTGTATAGCTACAAGCGTAGCTTTTCTGGGTTCTCCGCGAAGCTCAATGCAAGCCAAGCAATGACGTTATCAAAGATGGAAGGAGTGATATCCATATTCATGAGTAGAACTATGGAGCTCCACACAACAAGAAGTTGGGACTTCTTGGGGCTTCCCATTCCTTCGTATAGCGGTAGTAGAACGCCTGATACACCACGTTCGCGTAAGCTGGCCGATGGTGATGATGTTGTTGTTGGCATCTTCGATTCAGGCATATGGCCTGAATCGGAAAGTTTCGAGGATGATCAGTGGATGTTTCCGGTTCCATGCAGCTGGAAGGGAAAATGCGTGAAAGCGTATAGATTCAATCCTGCATTAGCTTGCAATCGCAAGCTAATTGGCGCTCGTTACTATCTCAAAGGTTTCGAGGCCGAATACGGAGGACTCAACACAAGCGGGAACCCTGAGTTTGAATCGCCTCGAGACTTTTTGGGGCACGGAACTCATACGGCTTCAACGGCCGTGGGTGGCATTGTAGAGGACGTGAGCTTCACAGGGTCGTCACTCGGAAAAGGCATTGCTCGAGGAGGAGCGCCAAGAGCTAGGCTGGCAGTGTACAAGGTGTGCTGGGGAAAGGACTACGAAGGGAAGTGCACGGATGCAGACGTGATGGCTGCGTTTGACGACGCTTTATGCGACGGAGTCGACGTTATCTCGGCATCGTTTGGAGGGTCGCCACCATTGGCTCCATTTATTGAGTCTAGCAGTGCGATTGGGTCGTTCCATGCCATGCAGAAGGGAGTGAGTGTTGTGTTCTCAGCTGGTAACGATGGACCTTATCGTTCACTCGTTCAAAATGTATTTCCGTGGAGCATTTGTGTTGCTGCTTCAACTATGGATCGAACCTTTCCCACTCAAATACTCATCCAAAACCGGATCTCTATTGTGGGGGAGAGCTTGATCACTACAAACATAATTAATGCAAAACTAGCGAATGCGATCAACTATTTTATAGATGGGTGA 1146 48.08 MRNPRMVDLVYIVYLGHTHLEDATLTSESHLRLLSKVFASEEDGKRAMLYSYKRSFSGFSAKLNASQAMTLSKMEGVISIFMSRTMELHTTRSWDFLGLPIPSYSGSRTPDTPRSRKLADGDDVVVGIFDSGIWPESESFEDDQWMFPVPCSWKGKCVKAYRFNPALACNRKLIGARYYLKGFEAEYGGLNTSGNPEFESPRDFLGHGTHTASTAVGGIVEDVSFTGSSLGKGIARGGAPRARLAVYKVCWGKDYEGKCTDADVMAAFDDALCDGVDVISASFGGSPPLAPFIESSSAIGSFHAMQKGVSVVFSAGNDGPYRSLVQNVFPWSICVAASTMDRTFPTQILIQNRISIVGESLITTNIINAKLANAINYFIDG 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5025859 5033535 + CmaCh02G008620.1 Cma02g00862 288613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00862 381 Gene3D Peptidase S8/S53 domain 123 340 IPR036852 GO:0004252|GO:0006508
Cma02g00862 381 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 371 IPR045051 -
Cma02g00862 381 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 6 89 IPR037045 -
Cma02g00862 381 CDD Peptidases_S8_3 87 340 IPR034197 -
Cma02g00862 381 SUPERFAMILY Subtilisin-like 118 346 IPR036852 GO:0004252|GO:0006508
Cma02g00862 381 Pfam Peptidase inhibitor I9 10 89 IPR010259 -
Cma02g00862 381 Pfam Subtilase family 121 325 IPR000209 GO:0006508|GO:0008236
Cma02g00862 381 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 8 371 - -
Cma02g00862 381 ProSiteProfiles Serine proteases, subtilase domain profile. 93 381 - -
Cma02g00862 381 Gene3D - 341 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00862 Cma-Chr2:5025859 Cma19g00834 Cma-Chr19:7898174 3.24E-94 dispersed
Cma02g00862 Cma-Chr2:5025859 Cma04g00183 Cma-Chr4:886209 2.43E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00862 - - csv:101206755 566.229