Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00864 ATGGAGGACTTTTTAGACAATATACCGCCCATGGATCTGATGCGTTCTGAGAAGATGACTTTTGTTCAGCTTATCATCCCTGTCGAGTCCGCTCATCGAGCCATTTCTTACCTTGGCGAGCTTGGCATCCTTCAATTTAAAGATTTAAACGAGGCCAAAAGTCCTTTCCAGAGAACCTTTGTTAACCAGGTAAAGCGATGTGCAGAGATGTCAAGGAAGCTGAGATTTTTCAAAGATCAATTCAGTAAAGCTGGTGTACTGGCATCTACTCGACCAATCCTTCAAGAACACATTGAGCTAGAGGATTTAGAGATACGACTAGCTGATCATGAGCATGAACTGATCGAAATGAATTCCAACAGTGAGAAACTTCGACAGTCATATAATGAACTCTTAGAATTCAAGATGGTATTGCAAAAGGCAAGTGTATTTTTGGTGTCCAGTAATAGCCATTCAGTCTCAGAAGAAAGGGAGTTGAATGAAAATGTTTTCATGAATGATAACTATGTTGATGATGGATTACCACTTGAGGAAATGAGACCTGGACCGTCCAGTCAATCTGGTTTGAGATTTATTTGTGGTATTATTTGTAAATCCAAAGTTCTTAGATTTGAAAGGATGCTGTTTCGTGCAACAAGGGGCAATATGCTTTTCAATCAGGCACCAGCAGATATACAGATCATGGATCCCATATCTACGGAAATGGTTGAGAAAACAGTATTTGTAGTGTTTTTCTCTGGGGAGCAAGCCAGAAATAAAGTTCTGAAGATCTGTGAGGCTTTTGGAGCAAATTGCTATCCTGTTCCTGAAGATATAACCAAACAAAGGAAGATAACTAGAGAAGTTTCATCTCGCCTCATTGAACTTGAAGCCACTTTAGATGCTGGGATCCGTCACCGAAATGAGGCTCTTGCATCGATTGGGTTTCACTTGATTAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATATGATACCCTGAACATGTTGAATTTTGATGTCACTAAAAAATGTCTTGTTGGAGAAGGCTGGTGCCCAATCTTTGCAAAATCTCAGATTCAAGAGGCACTTCAACGAGCAACATTTGATAGCAGTTCACAAGTGGGCATAATATTTCATGTGATGGATACGGTTGAATCCCCTCCTACATATTTTAGAACAAACCGTTTGACAAATGCTTTTCAGGAAATTGTTGATGCCTATGGTGTTGCTAGATATCAAGAAGCAAATCCTGCAGTTTACACTGTTATTACATTTCCGTTCCTATTCGCAGTTATGTTTGGGGATTGGGGTCATGGAATATGCTTGTTGCTTGGAGCTTTATTTCTTATAGCTCGTGAGAGTAAGCTCAATAATCAGAAATTAGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTTCTTCTTTTGATGTCCCTCTTTTCAATTTATTGTGGGTTGATCTACAATGAGTTCTTCTCTGTTCCGTATCATATATTTGGTGCATCTGCTTACAAGTGTCGAGATAATTCATGCAGTGATGCACACACTGTTGGGTTAGTTAAATACCGTGATGCCTACCCGTTTGGTGTTGACCCGAGTTGGCGTGGAAGTCGTTCAGAACTTCCTTTTCTGAACTCTCTTAAAATGAAGTTGTCTATCTTGTTGGGTATTGCCCAAATGAACTTAGGGATCATATTGAGTTATTTTAACGCACGTTTTATTGGAAGCTCAATTGATATCAGGTACCAGTTTGTACCACAAGTGATCTTTCTTAACAGCCTTTTTGGATATCTTTCTCTTCTCATTGTCATCAAGTGGTGCACTGGATCTCAAGCTGACCTCTACCATGTGATGATTTACATGTTTTTGAGCCCATTTGATGATCTTGGAGAGAACGAATTGTTTTGGGGCCAAAGACCACTTCAAGTTATCTTGTTGATATTGGCTATAGTTGCAGTGCCTTGGATGCTTTTTCCTAAGCCCTTTATCTTGAAAAAGATTCATACAGAGAGATTTCAAGGTCGTACTTATGGGGTGCTTGGATCCTTTGAGGTAGATCTTGAGATGGAACCTAATTCGGCAAAGGAACACCAAGAGGATTTCAATTTTAGCGAGATCTTTGTTCACCAAATGATTCACTCCATAGAATTTGTCTTGGGTGCAGTTTCAAATACAGCATCATATCTTCGACTTTGGGCTTTAAGCTTGGCGCACTCAGAACTGTCAACAGTTTTCTATGAGAAAGTTCTTCTCCTAGCTTGGGGGTATGACAGCTTTGTCATCCGGCTGATTGGTTTAGCTGTTTTTTCCTTTGCCACTGCTTTCATACTTCTTATGATGGAGACCCTTAGTGCCTTCCTTCATGCCTTGCGTCTTCATTGGGTTGAGTTTCAAAATAAATTCTACCTTGGTGATGGCCACAAGTTCAAACCATTTTCCTTTGCCTCCAACGAGGATGAAGATTAA 2454 40.02 MEDFLDNIPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGILQFKDLNEAKSPFQRTFVNQVKRCAEMSRKLRFFKDQFSKAGVLASTRPILQEHIELEDLEIRLADHEHELIEMNSNSEKLRQSYNELLEFKMVLQKASVFLVSSNSHSVSEERELNENVFMNDNYVDDGLPLEEMRPGPSSQSGLRFICGIICKSKVLRFERMLFRATRGNMLFNQAPADIQIMDPISTEMVEKTVFVVFFSGEQARNKVLKICEAFGANCYPVPEDITKQRKITREVSSRLIELEATLDAGIRHRNEALASIGFHLIKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKSQIQEALQRATFDSSSQVGIIFHVMDTVESPPTYFRTNRLTNAFQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALFLIARESKLNNQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDNSCSDAHTVGLVKYRDAYPFGVDPSWRGSRSELPFLNSLKMKLSILLGIAQMNLGIILSYFNARFIGSSIDIRYQFVPQVIFLNSLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPFDDLGENELFWGQRPLQVILLILAIVAVPWMLFPKPFILKKIHTERFQGRTYGVLGSFEVDLEMEPNSAKEHQEDFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDSFVIRLIGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYLGDGHKFKPFSFASNEDED 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5039469 5048577 - CmaCh02G008640.1 Cma02g00864 288615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00864 817 PANTHER VACUOLAR PROTON ATPASE A1 5 816 - -
Cma02g00864 817 PIRSF ATP6V0A1 9 817 IPR026028 GO:0000220|GO:0046961
Cma02g00864 817 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cma02g00864 817 PANTHER VACUOLAR PROTON ATPASES 5 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cma02g00864 817 Coils Coil 93 127 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00864 Cma20g00461 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00864 Cma-Chr2:5039469 Cma12g00431 Cma-Chr12:2249053 0 dispersed
Cma02g00864 Cma-Chr2:5039469 Cma20g00461 Cma-Chr20:2208366 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00864 K02154 - csv:101216514 1554.27