Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00883 ATGGCCGGAGGTGGCGCCGGAAGGTCCTTGGAAGAGACGGCCACATGGGCCGTCGCCGCCGTCTGCTTCGTCTTGGTCTTGATTTCCATTGTCATCGAACATAGTCTGCATCTCATCGGAAAGTGGTTTAAGAAGAAGCACAAGCGAGCTCTTTACGAAGCCCTTGAGAAGATCAAAGCAGAGCTGATGCTATTGGGGTTCATATCGCTGCTGCTGACGGTAGGACAAAGCCTAATCACCAATGTTTGTATACCGGAAGACGTGGCGGCCACGTGGCATCCATGTAGCCCCCAAAAGGAGGAGGAATTAAGTAAACAAGATGACGTGGTGAACACCGACACTAATCGCCGGAAACTTCTCGCCGTCTCCCCTGTCAATGCCACTTTCCGGCGCGTCCTCGCTGGGGGCGGCGGAACCGACAAATGTGCTGCTAAGGGTAAGGTTCCATTTGTGTCGGAAGAAGGCATTCATCAGCTACACATATTCATCTTCGTGTTGGCTGTCTTCCATGTTCTGTACTGTGTTTTAACTTTGGCTTTAGGGAATGCTAAGATGAGAAGTTGGAAGGCATGGGAAAAGGAAACAAGAACGGTGGAGTACCAATTTTCGCATGATCCAGAGCGATTCCGATTTGCAAGAGACACATCGTTTGGGAGAAGACATTTGAGTTTTTGGACCAAATCTCCTTCCCTCGTCTGGATTGTTTGTTTCTTCAGACAATTTGTTCGATCCGTTCCTAAAGTTGATTACTTGACATTAAGACATGGTTTCGTCATGGCTCATCTGGCACCACACAGCGATCAGAAATTCGACTTCCAAAAATACATCAAACGATCCCTCGAGGAAGATTTCAAGGTCGTCGTTAGTATTAGCCCTCCAATCTGGTTTTTGGCTGTCCTCTTCCTACTTTTCAACACCCATGGGTGGAGGGCGTACCTATGGCTTCCATTTATCCCATTAATCATTGTATTACTGGTGGGGACGAAATTGCAAGTGATAATTACGAAAATGGCAGTGAGGATTCAAGAAAGAGGCGAGGTGGTGAAGGGGGTGCCGGTGGTCGAGCCAGGGGACGAGCTTTTCTGGTTCAATCGGCCTCGCCTCATTCTTTATCTCATCAACTTCGTGTTGTTTCAGAACGCCTTTCAGCTCGCTTTCTTTGCTTGGACTTGGAAAGAATTCGGGATGAAATCGTGCTTCCACGAGCACGTAGAGGATTTGGTGATCAGAATAACAATGGGGGTTCTCGTTCAAATCCTTTGTAGTTACGTTACGTTGCCTCTTTATGCTCTTGTCACCCAGATGGGTTCCACAATGAAGCCAACAATTTTCAACGAAAGGGTAGCAACGGCGTTAAAAAACTGGCACCACACAGCTCGCAAACACATTAAACAAAATCAGGGTTCCATCACACCTATGTCTAGTCGCCCGCCAACCCCGTCCCACCATATGTCGCCGATGCACCTCCTCCGCCACTACCGAACCCAATTGGACAGTGTCCACACCTCTCCCAGACGATCTGTTTTTGACAATGACCATTGGGATCCTGACTCAACGTCGCCGTCACATCGCTTTCACCCTCGCGACATGGAGACTGGCGGTGATGTTGAGGTTGAGACTGATCATTCAAACCAACCCAATTCAACTCAAGTCGTGGATGTGGATGTTCAACCGATGGAGATGAATAATGATTCTGAACAGCATGAAATTAAAATGGGTTCGAATGAATTTTCGTTTGACAAAAGAATGGATAGAATATGA 1761 47.7 MAGGGAGRSLEETATWAVAAVCFVLVLISIVIEHSLHLIGKWFKKKHKRALYEALEKIKAELMLLGFISLLLTVGQSLITNVCIPEDVAATWHPCSPQKEEELSKQDDVVNTDTNRRKLLAVSPVNATFRRVLAGGGGTDKCAAKGKVPFVSEEGIHQLHIFIFVLAVFHVLYCVLTLALGNAKMRSWKAWEKETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPSLVWIVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFQKYIKRSLEEDFKVVVSISPPIWFLAVLFLLFNTHGWRAYLWLPFIPLIIVLLVGTKLQVIITKMAVRIQERGEVVKGVPVVEPGDELFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHVEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNERVATALKNWHHTARKHIKQNQGSITPMSSRPPTPSHHMSPMHLLRHYRTQLDSVHTSPRRSVFDNDHWDPDSTSPSHRFHPRDMETGGDVEVETDHSNQPNSTQVVDVDVQPMEMNNDSEQHEIKMGSNEFSFDKRMDRI 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5245432 5248925 + CmaCh02G008830.1 Cma02g00883 288634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00883 586 MobiDBLite consensus disorder prediction 500 538 - -
Cma02g00883 586 Pfam Mlo family 8 493 IPR004326 GO:0006952|GO:0016021
Cma02g00883 586 PANTHER MLO-LIKE PROTEIN 1 567 - -
Cma02g00883 586 MobiDBLite consensus disorder prediction 464 481 - -
Cma02g00883 586 MobiDBLite consensus disorder prediction 500 548 - -
Cma02g00883 586 MobiDBLite consensus disorder prediction 463 484 - -
Cma02g00883 586 PANTHER MLO-LIKE PROTEIN 1 1 567 IPR004326 GO:0006952|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00538 Cma02g00883 CCT
Cma01g00538 Cma02g00883 ECH
Cma02g00883 Cma20g00477 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00883 Cma-Chr2:5245432 Cma18g00888 Cma-Chr18:7659471 0 dispersed
Cma08g00991 Cma-Chr8:6184235 Cma02g00883 Cma-Chr2:5245432 1.28E-140 dispersed
Cma13g00190 Cma-Chr13:1471150 Cma02g00883 Cma-Chr2:5245432 1.17E-150 dispersed
Cma17g00044 Cma-Chr17:201164 Cma02g00883 Cma-Chr2:5245432 4.18E-141 dispersed
Cma02g00197 Cma-Chr2:879793 Cma02g00883 Cma-Chr2:5245432 3.35E-151 transposed
Cma03g01297 Cma-Chr3:8411062 Cma02g00883 Cma-Chr2:5245432 4.50E-154 transposed
Cma01g00538 Cma-Chr1:2790988 Cma02g00883 Cma-Chr2:5245432 1.20E-163 wgd
Cma13g00188 Cma-Chr13:1437806 Cma02g00883 Cma-Chr2:5245432 0 wgd
Cma02g00883 Cma-Chr2:5245432 Cma20g00477 Cma-Chr20:2307515 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00883 K08472 - csv:101212018 988.408