Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g00911 ATGGCTTTCTTTCAACCCCTTCTTACTCCCCCCTGTCATTGTTCATTAACTCTTTTTCTCTTTTTCCTTGTCGTACCATTGCTTCCTCCCGCCGCTCCCATGCCTTTGCACGAAGTTTACTCTCCTCGCTTGGCCTATAGGGGTCCGGTTATTCCGGTCAGCAATCTTGTCAAGTTTCTCGAGCGTCTTCAGGTTGTGGCGCTCAATTCCTTTGGTAAACTTGATTTCGATCTTAAATATTACGTCGATTTGTCGCTTAAATTTGATTTGAATTCCACTGAGAGGGCTTTCGATGCCCTTTCACGATCCTCCAATGGCTCTGTCCCGGTCGAGGATTTGAAGACGTTTATTGGCGAGTATTTCGATAGTGCTGGAACCGATATGGTGTACTCCGACCCTGTGGATTTTGTCCCTCGGCCTCAAGGGTTTTTGCCGAAGGTGGAGAATGCGGGGGTTAGAGCTTGGGCTTTGGAGATTCATAATTACTGGAAGAATCTTAGTCGGAAAGTCTCCGATGATATCATTCATCGCCCCGATGCTCACACTCTGCTGCCGTTGCCGATGCCCTGTGTCATTCCCGGAGCCAGATTCCGGGAAGTTTACTATTGGGATTCCTATTGGATTATCAGAGGATTGTTAGCTAGTAAAATGTATGATACTGCCAAGGGAATTGTTATCAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTTTGAATGGTGCTAGAGCTTATTACACTAACAGAAGTCAGCCTCCTCTCTTGAGCTCCATGGTTTATGACATATACCTTAGAACAGGTGATTTAGAGTTCGTGAGGAATGCCCTCCCAGCTTTGATCAAAGAGCATACGTTCTGGAATTCAGGATTCCATTCTGTTACTGTCCGGAAGGCTCCTGGTGGAAATCATTCTTTGTCTAGATATTATGCAATGTGGAATGAACCCAGGCCTGAATCTTCTCTTCTGGATGAGAAACTTGCCTCAAAGTTTGTGAATAACTATGACAAGCAGCGTCTATACAGTGAACTCGCATCGACTGCCGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATCACACGGACTTATCAACATTGGCTACAACTTCAATCTTGCCAGTTGATCTCAATGTATTCATACTCAAGATGGAACTTGACATCTCCAATTTGGCAAGAGCTGTTGGAGATTTCTGCCTTGCTTATAAATTTTTGGAGGCTTCACTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAACTCAGAGAAGGGACAATGGCTTGATTACTGGCTTGATAATGGCTCTCACAAGGGTGTTCATACATGGGATGCTCAGAACCAGAACAAGAACATATATGCTTCGAACTTCATTCCACTCTGGATCGAATCGTTCTACTCCGACAGCATACAGATGAAGAAAGTGTTGAAAAGCTTACGGAACTCAGGCTTGCTATGCAATGCCGGGATTGCAACTTCTACTATTAATTCAGGAGAACAATGGGATTTCCCGAACGGTTGGGCGCCGATTCAGCACATGATCGTCGAGGGACTGGCGAGGTCGGAGTTGAAAGAAGCAAGGGTATTGGCTGAGGATATGGCCGTGAGATGGCTTCGAACCAACTATGTGGCTTACAAGAAAACAGGGTATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTTGGCGCAGGAGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCATTCCTTGAAGAGTTTGGATGGCCCGAAGACCAAAATATTGACTGCTAA 1800 44.78 MAFFQPLLTPPCHCSLTLFLFFLVVPLLPPAAPMPLHEVYSPRLAYRGPVIPVSNLVKFLERLQVVALNSFGKLDFDLKYYVDLSLKFDLNSTERAFDALSRSSNGSVPVEDLKTFIGEYFDSAGTDMVYSDPVDFVPRPQGFLPKVENAGVRAWALEIHNYWKNLSRKVSDDIIHRPDAHTLLPLPMPCVIPGARFREVYYWDSYWIIRGLLASKMYDTAKGIVINLISMIDEFGHVLNGARAYYTNRSQPPLLSSMVYDIYLRTGDLEFVRNALPALIKEHTFWNSGFHSVTVRKAPGGNHSLSRYYAMWNEPRPESSLLDEKLASKFVNNYDKQRLYSELASTAESGWDFSSRWMRDHTDLSTLATTSILPVDLNVFILKMELDISNLARAVGDFCLAYKFLEASLVRKKTINSIFWNSEKGQWLDYWLDNGSHKGVHTWDAQNQNKNIYASNFIPLWIESFYSDSIQMKKVLKSLRNSGLLCNAGIATSTINSGEQWDFPNGWAPIQHMIVEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCGDFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5430313 5434015 + CmaCh02G009110.1 Cma02g00911 288662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g00911 599 Pfam Trehalase 74 590 IPR001661 GO:0004555|GO:0005991
Cma02g00911 599 PRINTS Glycosyl hydrolase family 37 signature 235 253 IPR001661 GO:0004555|GO:0005991
Cma02g00911 599 PRINTS Glycosyl hydrolase family 37 signature 305 322 IPR001661 GO:0004555|GO:0005991
Cma02g00911 599 PRINTS Glycosyl hydrolase family 37 signature 340 357 IPR001661 GO:0004555|GO:0005991
Cma02g00911 599 PRINTS Glycosyl hydrolase family 37 signature 372 389 IPR001661 GO:0004555|GO:0005991
Cma02g00911 599 PRINTS Glycosyl hydrolase family 37 signature 415 431 IPR001661 GO:0004555|GO:0005991
Cma02g00911 599 PRINTS Glycosyl hydrolase family 37 signature 493 509 IPR001661 GO:0004555|GO:0005991
Cma02g00911 599 PRINTS Glycosyl hydrolase family 37 signature 573 586 IPR001661 GO:0004555|GO:0005991
Cma02g00911 599 Gene3D - 62 598 IPR012341 GO:0005975
Cma02g00911 599 ProSitePatterns Trehalase signature 2. 500 509 IPR018232 GO:0004555|GO:0005991
Cma02g00911 599 SUPERFAMILY Six-hairpin glycosidases 71 592 IPR008928 GO:0005975
Cma02g00911 599 PANTHER TREHALASE 63 599 IPR001661 GO:0004555|GO:0005991
Cma02g00911 599 PANTHER TREHALASE 63 599 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g00911 K01194 - csv:101208719 1023.46