Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01015 ATGTCCGAACCACCTCCCTCCGTCTTCGATCATGATCCCTCCCCCTCCGCCGCCAAGCTCCGCAAGATCCCTCCCATCCCTATTCGCCGCGATACCAAACCCAATGCCGGAGACTTTGATCCCGATCAAGAACATGACCACGCCGAGGATCATCCTCCTCAACCTGGCGATTCGTCCATCATAATGGCCTCCTCCCTCGGGTTGAACCACATTCGGACGCGGTCTGCTCCTCTTCCGCTTCGGACTTGTGCCGTTGGCACGCCCTCCAATTTGGGCGATGATTCCAGGAATAATGTCGCCGACGGGAGTGAGTCGGAGCCAAAAAATTCCTCCACTGAACAGGGGACAAACGTTCCGTGGAGTCAACCGAACTCTTTAAGATATCCGTCGGCTCTGAATCATGATATTGAGGGTCATCATGCAGCATATACAAAGGAAATTCAGTCTCCACGATTCCGTGCAATACTGCGTGTTACTAGTGGAAGAAAGAAGAGAACCCCTGATATCAAAAGCTTCTCTCACGAGCTCAATTCCAAAGGAGTTCGCCCTTTTCCAGTTTGGAAGCCTCGGGCATTTGGACATTTGGAAGAGATCATGGTGGCTATCAGAGCAAAATTTGACAGGTTGAAGGATGATGTTAACTACGAACTGGGCATTTTTGCTGGAGATCTTGTAGATATACTTGAAAAGGCAGATCAATCCATGCCTGAACTTAAGGAGGGTTTGGAGGATTTGTTGGTGGTTGCTCGGAAATGTGCGACAATGTCCCCTACTGAATTCTGGACAAAAGGTGAAGGCATTGTCCAGAATCTAGATGACCGGCGCCAGGAGCTGTCATTAGGAATTCTTAAGCAAGCCCACACCCGCCTTCTTTTCATCCTGACACGATGTACGCGGCTTATTCAGTTCAGAAAGGAGAGTGGTTATGAAGATGAGCACATTTTGGGTCTTCATCAGCTTAGTGATCTAGGAATTTATCCAGAGAAAATCAGGCAGCTCGAACAACTTGAGTTTGGTGATCCATTGACTGGGAAAGAAGATATTGCGAAGCAGCTGAAGTTAGCTGGGAAGGATCAAGCCCATCGCATTGTGAAGCAAGATTCAGAACAAACTTTTAGTAATAGTGCTGGAAATGTTAGTCTGGACTCGGCCGTAAGTTTTGATTCATCTACAAGCATGTATAGGATGGCATCCTGGAAAAAGCTACCATCAGCAGCTGAGAAGAACCGGAAAGAGTCTGACCCTGTCGATACAACACATGCCAAGGATAAAATTGAGGTGTTGCATGTACATGAAGCTAAAACTGGGAGCAATGACAAATTAGATATCCCATCTAGTCATATTGAGCATTCAGAAGCACCCCCTAAAGAACAAAAAGTATCTTGGGGAATATGGGGTTATCATCAAAATGCCAATTTTGAGAGTTTGATGATCTGTCGGATTTGTGAGGTTGAAATTCCGACTATTCATGTTGAGGTGCATTCTCGAATTTGTACTATTGCCGATAGGTGTGATTTGAAAGGTTTAACTGTGAATGAGCGCCTTGAGCGGGTTGCTAGAGCTCTTGAAAAGATACTAGAGTCTTGGACGCCTAAAAGTACACCAAGAAGTAGCGATACTTCCTGTGCAAATTTTGATACTGTTAAGGTTTCTACATCAAATATGCAAGAAGAGATTTTTGAGTTGTCATCTAAAGGAATCAGTGTGTCATGTCGAAACTCTGAAGAGCTGCTTGATTCCCTCCCTGTTACTGGAAACTCTTCCTTTGTGGAAAGTCAGGATATTTTTCAGGATCCATCATACAATCGACCATTTATTTTCACACCAGAACACAGTACAAAATCAATGTCAGCTGGAACTCTAACACCAAGATCACCTCTTTTAACACCCAGATCCAGTCAGATTGAATTGCTGTTGCATGGGCGAAGAGCAATATCTGAACTTGAAAATTATCAGCAGATATACAAATTGTTGGATATTGTTCGTTCCATTGCAAACGTTAACAACTCTGGCTATGGTGCATTGGAGTGTATGCTCGATCGATTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTCGATGCCCTTGTTGTGGAGACTTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTACAACTTTGTGGGCAAATAGAAGATGATAAAGTAGACTCTTCAGTTGGCATAGTTGATGAAGAGAGTTCAGTGGAAGATGATACTGTTCGTAGTCTGCGTGCAAGTCCGGTTAACCCATGTTCAAAAGATCGAACATCTATTGAAGATTTTGAAATAATCAAACCAATTAGTAGAGGGGCCTATGGCCGAGTTTTCCTTGCCAGAAAACGAGCAACTGGAGACTTATTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAACGCAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTGGTCATGGAATACTTAAATGGTGGTGATATCTACTCCTTACTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGGATTTATATCGCTGAAATTGTTCTTGCTTTGGAGTATTTGCACTCTTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGCCAAGATGGTCACATTAAGTTGACAGATTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCAATCAATGGAACTGTTCCGCTTGGAGACAATGGACCTATATCTCAATCTTTGTCAAAAAGAGAACACCGACAAAAGCATTCAGTTGTTGGTACTCCAGATTATTTGGCCCCAGAGATACTTCTGGGCATGGGACATGGTGTAACTGCGGATTGGTGGTCTGTTGGAGTAATTCTTTTTGAGATGCTTGTAGGACTACCGCCGTTCAATGCAGAAAGTCCACAGCTAATTTTTGATAATATCATTAATAGAGACATACCATGGCCCAAGGTACCGGACGAGATGAGTTATGAAGCCCAGGATTTGATTGACAAATTGCTGACTGAAAATTCAGTTCAAAGACTGGGAGCTACAGGAGCCAGAGAGGTGAAGCAACATCCTTTCTTCAAGGATATTAATTGGGAAACACTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACATGATACAAGTTATTTCATGAGTCGGTATATATGGAATCCAGAAAACGAGGATTTTAATGGTGCTAGTGACTTTGATGATCATGATTTGACAGATACCAGCAGTAGTTCATTTAGCAACCTACAAGATGAAGATGGAGACGAATGTGGTAGTTTGGCTGACTTCTGTACACCAGCCCTTTCTGTGAAGTACTCGTTCAGCAATTTCTCTTTCAAGAATTTATCACAGTTGGCTTCCATCAATTATGATTTGGTGGTGAAGAGCAGCCAAAACTCGCCAGATATAACCAGACCATCCTTTCCTTGA 3528 43.08 MSEPPPSVFDHDPSPSAAKLRKIPPIPIRRDTKPNAGDFDPDQEHDHAEDHPPQPGDSSIIMASSLGLNHIRTRSAPLPLRTCAVGTPSNLGDDSRNNVADGSESEPKNSSTEQGTNVPWSQPNSLRYPSALNHDIEGHHAAYTKEIQSPRFRAILRVTSGRKKRTPDIKSFSHELNSKGVRPFPVWKPRAFGHLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDILEKADQSMPELKEGLEDLLVVARKCATMSPTEFWTKGEGIVQNLDDRRQELSLGILKQAHTRLLFILTRCTRLIQFRKESGYEDEHILGLHQLSDLGIYPEKIRQLEQLEFGDPLTGKEDIAKQLKLAGKDQAHRIVKQDSEQTFSNSAGNVSLDSAVSFDSSTSMYRMASWKKLPSAAEKNRKESDPVDTTHAKDKIEVLHVHEAKTGSNDKLDIPSSHIEHSEAPPKEQKVSWGIWGYHQNANFESLMICRICEVEIPTIHVEVHSRICTIADRCDLKGLTVNERLERVARALEKILESWTPKSTPRSSDTSCANFDTVKVSTSNMQEEIFELSSKGISVSCRNSEELLDSLPVTGNSSFVESQDIFQDPSYNRPFIFTPEHSTKSMSAGTLTPRSPLLTPRSSQIELLLHGRRAISELENYQQIYKLLDIVRSIANVNNSGYGALECMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVQLCGQIEDDKVDSSVGIVDEESSVEDDTVRSLRASPVNPCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFSGPSINGTVPLGDNGPISQSLSKREHRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGLPPFNAESPQLIFDNIINRDIPWPKVPDEMSYEAQDLIDKLLTENSVQRLGATGAREVKQHPFFKDINWETLARQKAMFIPSAEPHDTSYFMSRYIWNPENEDFNGASDFDDHDLTDTSSSSFSNLQDEDGDECGSLADFCTPALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDITRPSFP 1175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6025152 6036745 + CmaCh02G010150.1 Cma02g01015 288766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01015 1175 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 15 1174 - -
Cma02g01015 1175 MobiDBLite consensus disorder prediction 88 126 - -
Cma02g01015 1175 Gene3D Transferase(Phosphotransferase) domain 1 849 1071 - -
Cma02g01015 1175 ProSiteProfiles Protein kinase domain profile. 765 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g01015 1175 PANTHER SERINE/THREONINE-PROTEIN KINASE 15 1174 - -
Cma02g01015 1175 ProSiteProfiles AGC-kinase C-terminal domain profile. 1054 1155 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cma02g01015 1175 Pfam Protein kinase domain 765 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g01015 1175 SUPERFAMILY Protein kinase-like (PK-like) 762 1087 IPR011009 -
Cma02g01015 1175 MobiDBLite consensus disorder prediction 82 126 - -
Cma02g01015 1175 ProSitePatterns Serine/Threonine protein kinases active-site signature. 884 896 IPR008271 GO:0004672|GO:0006468
Cma02g01015 1175 MobiDBLite consensus disorder prediction 24 53 - -
Cma02g01015 1175 MobiDBLite consensus disorder prediction 1 61 - -
Cma02g01015 1175 CDD STKc_MAST_like 771 1058 - -
Cma02g01015 1175 SMART serkin_6 765 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g01015 1175 Gene3D Phosphorylase Kinase; domain 1 763 1080 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g01015 Cma15g01387 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01015 Cma-Chr2:6025152 Cma08g01079 Cma-Chr8:6729107 2.25E-85 dispersed
Cma01g00745 Cma-Chr1:3970817 Cma02g01015 Cma-Chr2:6025152 0 transposed
Cma15g01387 Cma-Chr15:8686996 Cma02g01015 Cma-Chr2:6025152 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68356 PF00069 Pkinase 1.30E-63 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01015 - - csv:101210442 1971.05