Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01139 ATGGCTTCCGATCCGAAGGTTCATCTGTTCGAAGAAGTGGCAAAGCACAATAAAACGAAGGATTGTTGGCTTGTAATCTCTGGAAAGGTTTATGATGTAACTCCTTTCATGGAGGACCACCCGGGCGGCGATGAAGTATTGTTGTCTGCAACGGGAAAAGATGCCTCGAACGATTTCGAGGATGTCGGGCATAGTGATTCAGCAAGAGAAATGATGGACAAATACTACATCGGAGAAATTGATCCTTCAACGGTTCCTTCGAAGAAGATTTACATTCCATCACAACAAACCCAGTACAATCAAGATAAGACGCCCGAGTTTGTGATCAAGATCTTACAGATACTGGTTCCCATATTTATTTTGGGTTTGGCATTTGCGGTTCGACACTACACCAAGAATGAATGA 405 43.21 MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDASNDFEDVGHSDSAREMMDKYYIGEIDPSTVPSKKIYIPSQQTQYNQDKTPEFVIKILQILVPIFILGLAFAVRHYTKNE 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6733324 6735930 + CmaCh02G011390.1 Cma02g01139 288890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01139 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cma02g01139 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cma02g01139 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cma02g01139 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cma02g01139 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cma02g01139 134 PANTHER CYTOCHROME B5 1 132 - -
Cma02g01139 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Cma02g01139 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Cma02g01139 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cma02g01139 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 86 IPR036400 -
Cma02g01139 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cma02g01139 134 Gene3D - 1 87 IPR036400 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g01139 Cma15g01010 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01139 Cma-Chr2:6733324 Cma14g01890 Cma-Chr14:13376466 1.56E-69 dispersed
Cma08g00854 Cma-Chr8:5201414 Cma02g01139 Cma-Chr2:6733324 2.01E-41 transposed
Cma14g02130 Cma-Chr14:14625342 Cma02g01139 Cma-Chr2:6733324 3.13E-47 wgd
Cma15g01010 Cma-Chr15:6090522 Cma02g01139 Cma-Chr2:6733324 1.32E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01139 K23490 - csv:101207109 262.307