Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01162 ATGATGAAGCAATGGGGAGGCACAGATTCAGAATCTGTTGCAACCTTATGGACATTGTGCGCGGCTCTGGCTTTTGCGATAGCTCCAATCGTTGGATCAGTTTTATCACCAAATCACCAGTTTCGTGGAATTTCTCCCCAAGATGTGATGTATTACAAATCGTCCGACGTGATCAAATGTAGAGACGGTTCCAACAAATTTACTAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCCGCATGCCCAAATGGAAAGTTCTATTGTCGAAATGCTGGGCACGTTCCACTTTTGCTGTTTTCTTCAAGGGTGAACGACGGTATATGTGATTGTTGTGATGGAAGTGATGAATATGACAACAAAGTCAAATGTCCAAATACATGCTGGGAAGCTGGGAAAGTGGCTAGAGATAAGTTGAAGAAAAAGATTGCCACCCTTGAAGAAGGTGTTAAAATTCGTAAAGTAGAAGTTGAACATGCGAAAGTCGCAATAACTAAGGATGAGGCAGAGCTATTGAAGTTGCAAAACGAGGAAAAAGTATTAAAAGGGCTCGTGGAACAACTTCAAGAGCGCAAAGAACAAATAGAGAAGTTAGAAGAAGAGGAGCGATTATCGAAAGAGAAAGAAGAGAAGAAACATTTGGAGAGAGAAAAAGATGAGACTAAAAAAATTGAATCGACAGAAACAGCAGATGTTGGGGAAAGCAAAACTGAAGAGAAAGACAATTCGGTAAAGGATGATGCTACAGAAAATGTTGCCGAGGAATATAAAGGAGAAGGCATTGGAGATGATAGAAGTGGGAACTGGGAGGACTCTGCCACAAATGAGGGTAGGGTGGAAGAAGCAGTTGACTCAGAATTTGAAGCTCAGCTTCCTAATAAACCGGAAACAGGATCATCAATGCCGAAAGACATAGAAGAGGATACAGCATTAGAGAAAGACAAACCCCTGGCTAAATCTGAAACTGGAGAAAGTGTCGGCTCTAGAGAATCATCTGAAGAAGTCACGAAAGAGAATGATGCTAATTCAGAGTTATCACGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACCGGAGAAAATACTGAAGAACAGTCGGGAAATGCGGAAAGCATGAATGACAGTGATGAAGAAAATCATGATATCTTAAAAGACACACACGACAATGATGGTTATGCTTCAGACACTGATGGTGAGCACCAAAAATACGACGATGACAACCAAAGATATGATGATGATCTAGAGGATGATTTATATGATATCAGAGATGAAAATCATGATGAGTCTACTTCGTCAGAGAGATATTATTCAGATTCAGAATTGGACTCACCAGATATGGAAACCAAAAGTACCCCCACCTGGCTTGAGAAGATACAAAGAACTGTTCGAAAGGTCCTCAAAGCTGTTCATATATTCCAGCCTCCAGTGAACCAATCAGATGCTGCAAACATTCGCAAGGAATATGATGAATCCAATGCCAGGTTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTGCAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTTTATGACCAATGTTTTGAAAGCAAGAAAAACAAATACATTTACAAAATCTGCCCTTACAAGCAAGCTTCACAGGTCGAGGGGCACTCGACAACTCGTTTGGGGCGCTGGAGTAAATTTGAGGACTCATATGGGGTTATGATCTTTTCAAGTGGGGATCATTGCTGGAATGGACCTGATAGAAGCTTGAAGGTCAAGCTAAGATGTGGGCTTAAAAATGACATAACCGATGTAGACGAGCCAAGTCGTTGCGAATACACGGCACTTTTATCAACCCCAGCCGCTTGTGTAGAGGAAAAACTTCAGGAACTGAAAAACAAGTTGGAGATGCTGAATAAAGAAGGGCCAGAGAAGCATGATGAGCTTTGA 1962 41.79 MMKQWGGTDSESVATLWTLCAALAFAIAPIVGSVLSPNHQFRGISPQDVMYYKSSDVIKCRDGSNKFTKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDGICDCCDGSDEYDNKVKCPNTCWEAGKVARDKLKKKIATLEEGVKIRKVEVEHAKVAITKDEAELLKLQNEEKVLKGLVEQLQERKEQIEKLEEEERLSKEKEEKKHLEREKDETKKIESTETADVGESKTEEKDNSVKDDATENVAEEYKGEGIGDDRSGNWEDSATNEGRVEEAVDSEFEAQLPNKPETGSSMPKDIEEDTALEKDKPLAKSETGESVGSRESSEEVTKENDANSELSREELGRLVASRWTGENTEEQSGNAESMNDSDEENHDILKDTHDNDGYASDTDGEHQKYDDDNQRYDDDLEDDLYDIRDENHDESTSSERYYSDSELDSPDMETKSTPTWLEKIQRTVRKVLKAVHIFQPPVNQSDAANIRKEYDESNARLSKIQSRISSLSQKLQNDFGPEKEFYSFYDQCFESKKNKYIYKICPYKQASQVEGHSTTRLGRWSKFEDSYGVMIFSSGDHCWNGPDRSLKVKLRCGLKNDITDVDEPSRCEYTALLSTPAACVEEKLQELKNKLEMLNKEGPEKHDEL 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6847843 6857267 - CmaCh02G011620.1 Cma02g01162 288913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01162 653 Coils Coil 166 233 - -
Cma02g01162 653 Coils Coil 491 518 - -
Cma02g01162 653 PANTHER BNACNNG14010D PROTEIN 35 653 - -
Cma02g01162 653 Pfam Glucosidase II beta subunit-like 38 173 IPR028146 -
Cma02g01162 653 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 35 653 IPR039794 -
Cma02g01162 653 Gene3D - 529 628 IPR009011 -
Cma02g01162 653 MobiDBLite consensus disorder prediction 208 296 - -
Cma02g01162 653 ProSiteProfiles MRH domain profile. 534 629 IPR044865 -
Cma02g01162 653 MobiDBLite consensus disorder prediction 208 461 - -
Cma02g01162 653 Coils Coil 625 652 - -
Cma02g01162 653 MobiDBLite consensus disorder prediction 383 418 - -
Cma02g01162 653 Pfam Glucosidase II beta subunit-like protein 495 638 IPR036607 -
Cma02g01162 653 MobiDBLite consensus disorder prediction 309 360 - -
Cma02g01162 653 Gene3D - 87 138 IPR036055 GO:0005515
Cma02g01162 653 SUPERFAMILY Mannose 6-phosphate receptor domain 534 627 IPR009011 -
Cma02g01162 653 MobiDBLite consensus disorder prediction 433 455 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01162 Cma-Chr2:6847843 Cma19g00902 Cma-Chr19:8196869 3.07E-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01162 K08288 - csv:101221877 955.666