Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01214 ATGCCTTCTTTCAAAGCTATGATTCCTTTGGCCCTTTGTGTGTGTTTCTTGGTTGGGTCCGTTACTTCTCAGCTCACCTCCACCTTCTACGACACTACTTGCCCCAATGTGTCTAGCATTGTGCAAGGCGTCGTGCAGCAAGCTCTCCAAACTGACGATCGTGCTGGTGCTAAACTCATCCGTCTTCACTTTCACGACTGTTTTGTAGATGGATGTGATGGGTCTGTTCTACTAGAGGATCAAACAGGCATAGTGAGCGAGCTCGGTGCTCCAGGAAACGGAGGCATCACAGGTTTCAATATTGTCAACGACATTAAAACCGCAGTTGAGAATGTTTGTCCTGGTGTTGTCTCCTGTGCTGATATTCTAGCGCTTGGTTCTCTATTTGCTGTCACTTTGGCGAGCGGGCAGGGGTGGACGGTCCCATTGGGGAGAAGGGATAGTAGAACAGCGAATTTGGATGGAGCTAGAAATAGGCTTCCAAGTCCGTTTGAGGATCTCACAGCACTTCAAAAGAAGTTCAGGGACGTGGGGCTAGACGACACAACAGACCTCGTAGCTTTATCAGGCGCACACACGTTCGGGCGCTCAAGGTGCAGATTCTTCGACGGACGGCTGAACACATCCAACCCAGACCCAACCCTGGACTCGACATACGCCGACCAGCTACGACAAAGCTGTCAGCCGGGGCGTGACACATTCGTGAACCTGGACCCGACAACGCCCGATACGTTCGACAACAACTACTTCACGAATCTTCAGAACAACCGTGGGCTTCTAGGAAGTGACCAAGTGTTGTTGTCCACCAGTGGGGCTCCAACTGTGAGTATTGTGAACAACTTCGCCAACAGCCCGAGCCAATTCGCGAGCGCCTTCGCTCAGTCCATGATTAACATGGGAAATCTGAGCCCGTTGACGGGTAGCAGCGGGGAAATTAGGTCCAATTGCAGAAGGCTGAACTGA 963 51.51 MPSFKAMIPLALCVCFLVGSVTSQLTSTFYDTTCPNVSSIVQGVVQQALQTDDRAGAKLIRLHFHDCFVDGCDGSVLLEDQTGIVSELGAPGNGGITGFNIVNDIKTAVENVCPGVVSCADILALGSLFAVTLASGQGWTVPLGRRDSRTANLDGARNRLPSPFEDLTALQKKFRDVGLDDTTDLVALSGAHTFGRSRCRFFDGRLNTSNPDPTLDSTYADQLRQSCQPGRDTFVNLDPTTPDTFDNNYFTNLQNNRGLLGSDQVLLSTSGAPTVSIVNNFANSPSQFASAFAQSMINMGNLSPLTGSSGEIRSNCRRLN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7173461 7175040 - CmaCh02G012140.1 Cma02g01214 288965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01214 320 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Cma02g01214 320 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 Gene3D Peroxidase, domain 2 161 299 - -
Cma02g01214 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PANTHER PEROXIDASE 72-RELATED 16 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma02g01214 320 Gene3D - 29 320 - -
Cma02g01214 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cma02g01214 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cma02g01214 320 PANTHER PEROXIDASE 58 16 320 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g01214 Cma20g00048 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01214 Cma-Chr2:7173461 Cma20g00048 Cma-Chr20:216888 1.47E-133 dispersed
Cma02g01214 Cma-Chr2:7173461 Cma02g01215 Cma-Chr2:7176733 1.33E-80 tandem
Cma15g01367 Cma-Chr15:8559098 Cma02g01214 Cma-Chr2:7173461 5.35E-129 transposed
Cma02g01214 Cma-Chr2:7173461 Cma20g00047 Cma-Chr20:208905 1.90E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01214 K00430 - csv:101212957 481.1