Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01216 ATGGCCTCCGCCAATGCCGTTGCCTTCTTTTTCTTTGTGGCTCTTCTCCTCCCTGCCTCTTTAGCTCAACTCTCCGAGAACTTCTACGATAAAACTTGCCCAACTCTCCCCAACATTGTCCGCGCCGCCGTCAAGAAAGCCATTGATTCCGACGTCCGCGCCGGCGCTAAACTCATCCGCCTCCATTTTCATGATTGCTTCGTCAATGGCTGTGACGGCTCTGTTTTGTTAGTAGATGCTCCGGGCATAATCAGTGAGCTCAACTCACCCGGAAATGAAGGAATCCAAGGACTTGAAATTGTCGACGCCATCAAAGCCGACGTCGAGAGGGGCTGTCCCGGCGTAGTCTCCTGCGCCGACATCCTCGCTCAGGCCTCGAAAGACTCTGTCAATCTGCAAGGGGGGCCTAGTTGGAGAGTGTTACACGGAAGAAGAGACAGTCGAATAGCGAACAAAACAGGGGCAGATGCGAACCTCGCAAGTCCCTTCGAGACTCTGGTTCAACTGAAAGCCAAATTCGCAGCGGTTGGCCTCGGAACAACCGACCTCGTCGCACTATCCGGAGCGCATACATTTGGGCGATCGAGGTGCAGATTCTTCAGCCACCGATTTAGCAATTTCAACAATACCGGAAGCCCAGATCCATCGCTGAACCCCAGCTACAGGCAAGTCCTAGAAGGGGTGTGCTCGGCAGGTCCAGACACAAGAGCCAATTTCGATCCAACAACCCCGGACGTGTTCGACAAAAACTACTACACCAACCTTAAAGTGGGGAAAGGACTCCTACAGAGCGACCAAGAGCTGTTCTCCACTCCTGGGGCGGACACAATCGCGATTGTGGACAGCTTTGCCGACAGAGAAGGGACGTTCTTCAAGGAGTTCAGGCAGTCGATGATCAACATGGGGAATATCAAGCCTTTGACTGGAAGTAGTGGGGAAATCAGAAGGAACTGCGCGAGGGTGAACGCAGCAAGGATAGGTGGAGAAGGGCACGATGTTATGTAA 1005 53.13 MASANAVAFFFFVALLLPASLAQLSENFYDKTCPTLPNIVRAAVKKAIDSDVRAGAKLIRLHFHDCFVNGCDGSVLLVDAPGIISELNSPGNEGIQGLEIVDAIKADVERGCPGVVSCADILAQASKDSVNLQGGPSWRVLHGRRDSRIANKTGADANLASPFETLVQLKAKFAAVGLGTTDLVALSGAHTFGRSRCRFFSHRFSNFNNTGSPDPSLNPSYRQVLEGVCSAGPDTRANFDPTTPDVFDKNYYTNLKVGKGLLQSDQELFSTPGADTIAIVDSFADREGTFFKEFRQSMINMGNIKPLTGSSGEIRRNCARVNAARIGGEGHDVM 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7179685 7181518 - CmaCh02G012160.1 Cma02g01216 288967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01216 334 ProSiteProfiles Plant heme peroxidase family profile. 23 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cma02g01216 334 PANTHER PEROXIDASE 58 12 322 - -
Cma02g01216 334 Pfam Peroxidase 40 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 Gene3D - 28 322 - -
Cma02g01216 334 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PANTHER PEROXIDASE 72-RELATED 12 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma02g01216 334 Gene3D Peroxidase, domain 2 160 301 - -
Cma02g01216 334 CDD secretory_peroxidase 23 321 IPR033905 GO:0004601|GO:0042744
Cma02g01216 334 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01216 Cma-Chr2:7179685 Cma20g00048 Cma-Chr20:216888 0 dispersed
Cma02g01215 Cma-Chr2:7176733 Cma02g01216 Cma-Chr2:7179685 3.30E-21 tandem
Cma02g01216 Cma-Chr2:7179685 Cma02g01217 Cma-Chr2:7183736 1.90E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01216 K00430 - csv:101217543 541.962