Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01270 ATGGCGCCCGACAATTTTCCCATATTGTTTTCCTTCATCGCCGCCCTTTTAGCCGCCATTTTGAGCTCTGCAAATGGGTCGGAAAGAAAAGCTCATATTGTTTACATGGGCGCAATCCAAAACAGAGCAATGGCGGAATCGACCCACCATTTGAATCTTCTTCGCTCGGTAATTGGAACCTCTTCCGTAACAGAAGGTTCTTACATTCGTAGCTATGGAAGAAGCTTTAATGGATTTGTTGCGAAACTCACCGGAGCTGAAGCAGAGCAACTCGCCGCCATGGACGGTGTGGTCTCTGTTTTCGAAAGCAAGGTATTCAAAACCCAAACGACAAGATCATGGGACTATTTGGGATTCCCTGCAAAACCCACAAGAAATCTCGCCGGTGAAACTGACGTCATAATTGGGTCAATCGACACGGGGATTTGGCCGGAATTGGAAAGCTTCAACGACGAGGGTATAGGTCCACCGCCGGCGCGGTGGAGAGGTACATGTGCCGGAGGAGGAAATTTCACGTGCAACAATAAAGTGATCGGAGCTCGTTTTTACACCTCCATGTCCGCCAGAGACAACGTCGGCCATGGCTCACACACCGCCTCCACAGCCGCAGGAAAATTAGAGAAAACGACTGGTTTTTATGGACTTGCCGGCGGAAATGCCAGGGGAGCAGTTCCTTCTTCGAGACTAGCGGTTTATAAAGTTTGCAATCCGGATTGCTTAGAAGAGAATATTCTGGCGGCGTTTGACGACGCCATCGCCGACGGCGTGGATCTTATCACGATTTCAATTGGCGGAGTCGGTGGGTTTAATTTTGAACATGACTCAATGGCAATTGGGTCTTACCACTCGATGGCTAAAGGAATCTTAACCGTCCAATCCGCCGGAAATTATGGGCCGGTGGACGGAACAGTGGGAAGTGTAGTTCCGTGGGTATTCACCGTCGCCGCCACCACCACAGACAGAACCATCGTAGACAAGGTTGTTCTCGGCGACGGAAACACCGTGAATGGGTATTCCGTCAACACCTTCGCTCCAAACCAAAACGTTCCATTAATTTACGCAACAAACGCTTCCAGAAATTGTTCATCAAAAAATGCAGAAATTTGCAGCGATGGTTGCTTGGATCCATTGTTGGTGAAAGGGAAGATCGTTCAATGTAAGGCCTTCGACGGCGCTTCCAGAGCTTTCAATGCCGGAGCCGCCGGAGCAATTGTTCTTAACGACAATGCCGCCAATGTTTCCTTCGTTCTTCCCTTCCCTGCAATCGCTTTGAAAATGGCGGATTATAAAAGTGTTGCAAATTACGCAATCTCTGCAACAAATCCCAATGTCACGATCTTTAGAAGCGTCGCTACTAAAGATCCTTACGCGCCGACTATCGCCGATTTCTCTAGCCGCGGCCCCAACATGTGGATGCTGGAGATCTTGAAGCCCGACATCGCCGCCCCCGGCGTCGAAATCCTCGCCTCGTTTTCTCCCATCGCGGCTCCTTCCGGCAATGTCGGAGACAAAAGATCTGTCGAATTTTCGATTCTGTCCGGCACTTCCATGTCTTGTCCCCATGTCGCCGGTGTCGCCGCTTATGTAAAGAGTTTCCATCCAAATTGGTCGCCGGCAGCGATCAAATCAGCCATCATGACGACGGCTAAACAAATCGTTCGTACGGATGGAATTTTAATTCGTGAATTTCTTTACGGGTCGGGTTTAATCGATCCAAATCGAGCAATCGAACCCGGGCTTGTTTATGAAATTTTTGAAAAAGACCACTTGAATGTGCTGTGTGCAAAGGGGTATGATTCAAAGACGATGGAAGCATTTGCGGGAAATGATAGTGTTTGTTCTAAAACTTGGACGAAATTTCTAGCTCGAGATTTGAATTACCCTGCAATGGTGGCTCATGTTCTACCGAAGAAACCGTTTGTGGTTAAGTTTCAAAGAACTGTGACTAATGTTGGAGTTGCCAACTCAACTTATAGATCAAAGATCTTGTCGTTTTCTGGAGTTAATGTTTTGAAGTCACGGGAAAAACTTAATGTGAGTGTTAAGCCTCAGGAACTATGGTTTGAGCATTTGAATGAGAAGAAGAGTTTTGTTGTGACGGTGGTCGGAGGGGCAATTTCAACTGAGATTGTTTTTTCTTCGGCATTAATATGGAGTGATTTGGACCATGAAGTTAGGAGTCCGATTGTTGTGATGATCAAACCACCACTCTCTACTATCTCAAACTAA 2229 47.29 MAPDNFPILFSFIAALLAAILSSANGSERKAHIVYMGAIQNRAMAESTHHLNLLRSVIGTSSVTEGSYIRSYGRSFNGFVAKLTGAEAEQLAAMDGVVSVFESKVFKTQTTRSWDYLGFPAKPTRNLAGETDVIIGSIDTGIWPELESFNDEGIGPPPARWRGTCAGGGNFTCNNKVIGARFYTSMSARDNVGHGSHTASTAAGKLEKTTGFYGLAGGNARGAVPSSRLAVYKVCNPDCLEENILAAFDDAIADGVDLITISIGGVGGFNFEHDSMAIGSYHSMAKGILTVQSAGNYGPVDGTVGSVVPWVFTVAATTTDRTIVDKVVLGDGNTVNGYSVNTFAPNQNVPLIYATNASRNCSSKNAEICSDGCLDPLLVKGKIVQCKAFDGASRAFNAGAAGAIVLNDNAANVSFVLPFPAIALKMADYKSVANYAISATNPNVTIFRSVATKDPYAPTIADFSSRGPNMWMLEILKPDIAAPGVEILASFSPIAAPSGNVGDKRSVEFSILSGTSMSCPHVAGVAAYVKSFHPNWSPAAIKSAIMTTAKQIVRTDGILIREFLYGSGLIDPNRAIEPGLVYEIFEKDHLNVLCAKGYDSKTMEAFAGNDSVCSKTWTKFLARDLNYPAMVAHVLPKKPFVVKFQRTVTNVGVANSTYRSKILSFSGVNVLKSREKLNVSVKPQELWFEHLNEKKSFVVTVVGGAISTEIVFSSALIWSDLDHEVRSPIVVMIKPPLSTISN 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7445329 7447557 - CmaCh02G012700.1 Cma02g01270 289021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01270 742 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Cma02g01270 742 SUPERFAMILY Subtilisin-like 109 580 IPR036852 GO:0004252|GO:0006508
Cma02g01270 742 Gene3D - 593 733 - -
Cma02g01270 742 Pfam Subtilase family 132 552 IPR000209 GO:0006508|GO:0008236
Cma02g01270 742 CDD Peptidases_S8_3 106 549 IPR034197 -
Cma02g01270 742 Pfam Peptidase inhibitor I9 32 108 IPR010259 -
Cma02g01270 742 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 734 IPR045051 -
Cma02g01270 742 Gene3D Peptidase S8/S53 domain 132 588 IPR036852 GO:0004252|GO:0006508
Cma02g01270 742 Gene3D - 320 453 - -
Cma02g01270 742 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Cma02g01270 742 PRINTS Subtilisin serine protease family (S8) signature 190 203 IPR015500 -
Cma02g01270 742 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Cma02g01270 742 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 31 734 - -
Cma02g01270 742 ProSiteProfiles Serine proteases, subtilase domain profile. 113 576 - -
Cma02g01270 742 Pfam Fibronectin type-III domain 624 731 IPR041469 -
Cma02g01270 742 CDD PA_subtilisin_like 327 446 - -
Cma02g01270 742 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01270 Cma-Chr2:7445329 Cma04g00184 Cma-Chr4:894719 0 dispersed
Cma02g01270 Cma-Chr2:7445329 Cma02g01271 Cma-Chr2:7448114 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01270 - - cmax:111490708 1452.96