Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01271 ATGGCGCCCAACAATTTTCCCATATTGTTTTCCTTGATCGCCGCCCTTTTAGCCGCCATTTTCACCTCTGCAAATGGGTCGGAAAGAAAAGCTCATATTGTTTACATGGGCGCAATCCAAAACAGAGCAATGGCGGAATCGACCCACCATTTGAATCTTCTTCGTTCGGTAATTGGAACCTCTTCTGTAACAGAAGGTTCTTACATTCGTAGCTATGGAAGAAGCTTTAATGGATTTGTTGCAAAACTCACCGGAGCTGAAGCTGAGCAACTCGCCACCATGGACGGCGTGGTCTCTGTTTTCGAAAGCAAGGAACTCAAAACCCAAACGACAAGATCATGGGACTTTCTGGGGTTCCAACAACCCAAACGAAATCTCGCCGGTGAACTTGACGTCATAATTGGGTCAATCGACTCTGGAATTTGGCCGGAATCGGAAAGCTTCAACGACGAGGGGATAGGCCCGCCACCGCAAAAATGGAGAGGGGTGTGTGCCGGGGGAGAGAATTTTACGTGCAATCATAAGGTGATTGGAGCTCGTTATTACTCCACCTCATCGGCGAGGGACGACAAAGGCCATGGCACTCACACTGCCTCCACGGCGATCGGAAAATCAGTAACAACGGACGGATTTTATGGGATTGCCGGCGGAGTTGCGAGAGGAGCCGTTCCTTCTTCAAGACTTGCAGTTTATTCTGCGTGCAGTCCGAGTTGCACAGATGTCGAAATTTTGGCGGCGTTTGACGACGCCATTGCCGACGGTGTCGATATTATCACCATTTCACTTGGCGGCTTCGATTTGTCTGATTTAAGAGTCGACTGCATTGCCATTGGGGCTTATCACGCCATGGTTAGAGGAATCCTGACCGTCCAGTCCGCTGGAAATGATGGGCCGGTGGTCGGATCGGTGGAAAGTGTAGCTCCGTGGCTGTTTTCGGTCGCAGCCACCACTACAGATCGATCCATCATAGACGAGACCGTTCTGGGGAATGGAAAGATAGTGAGTGGCTATTCAATCAACCCCTTCACTCCGAACAAGAATGTTACATTAATTTATGGAACAAACGCTTCCAAAAGCTGTTCATTTCAAAACCCAGAAGTGTGCAGTTGTCTTGATCCAAAATTGGTGAAAGGGAAGATCGTTCAGTGTAAGAGCTTCACCGGAATTTTCAAAGCCGTCGATGCCGGAGCAGCCGGCGCCATTGTTCTCAACGACAAAGCCGACAATGTTTCGTTCATTGTTCCCCTCCCTGCAATCGCTTTGAATTTCACAGCTTACGAACAAGTAGCAAATTACGCAATCTCTGAACCAAATCCCCATGTCCGAATCCTCAAAAGTGTCGCCATTAAAGATGGTTATGCTCCGATGGCCGCTCAGTTCTCCAGCCGCGGCCCCAATCTCTTGTTGCCGGATATCATGAAGCCCGACATCGCCGCCCCCGGTGTTGAAATCCTCGCCTCCGTTAATCCTCAACCACCGCAGTCAGACACTCCCGGCGACAATAGAACTGTCAATTTCACAATAATGTCGGGCACTTCCATGGCCTGTCCCCATGTTGCTGGTTTAGCTGCTTATGTAAAGAGCTTCCATCCAAATTGGTCTCCGTCGGCGATTAAATCGGCCATCATGACGACGGCGGAAGAAATGACCAATACCGACGGATTTGTAAGTGGGGAATTTCTTCACGGGTCGGGTCAAATCAATCCAAAACAAGCAATCGAACCCGGACTTGTCTACGAAATTTTTGAAGTTGATTACTTGAAATTTCTGTGTGGGAATGGATTCGATTCCAAGTCAGTGAGGGGCATTTCAGGAAATAAGAGTGATTGTTCGAAATTTTCGACTAAATTCTCTCCGCAAGATTTAAATTACCCAGCAATGGTGTTTGAAGTTTCGCCAATGAAGCCGTTTGTGATTAAGTTTCAGAGAACAGTGACCAATGTCGGAATTGCAAACTCTACTTATAAGTCAGAGTTTTCGGCGTTTTCGGTAGTTTATGTTCTGAAGTCATCCGAAAAGCCTAATGTAAGCGTTGAGCCTCCAGAGTTGACGTTTAGAGATTTGAATGAGAAGAAGAGTTTTATCGTGACAGTAACTGGTGGGTCGATTCCGGCAAGGACAGGATTTTCTTCTGCATTGGTTTGGAGTGACGGAATCCATAAAGTTAGAAGTCCAATTGTGGTGAATGTTAAATTACCACCTATTCCTACCTCAAACTAA 2220 47.25 MAPNNFPILFSLIAALLAAIFTSANGSERKAHIVYMGAIQNRAMAESTHHLNLLRSVIGTSSVTEGSYIRSYGRSFNGFVAKLTGAEAEQLATMDGVVSVFESKELKTQTTRSWDFLGFQQPKRNLAGELDVIIGSIDSGIWPESESFNDEGIGPPPQKWRGVCAGGENFTCNHKVIGARYYSTSSARDDKGHGTHTASTAIGKSVTTDGFYGIAGGVARGAVPSSRLAVYSACSPSCTDVEILAAFDDAIADGVDIITISLGGFDLSDLRVDCIAIGAYHAMVRGILTVQSAGNDGPVVGSVESVAPWLFSVAATTTDRSIIDETVLGNGKIVSGYSINPFTPNKNVTLIYGTNASKSCSFQNPEVCSCLDPKLVKGKIVQCKSFTGIFKAVDAGAAGAIVLNDKADNVSFIVPLPAIALNFTAYEQVANYAISEPNPHVRILKSVAIKDGYAPMAAQFSSRGPNLLLPDIMKPDIAAPGVEILASVNPQPPQSDTPGDNRTVNFTIMSGTSMACPHVAGLAAYVKSFHPNWSPSAIKSAIMTTAEEMTNTDGFVSGEFLHGSGQINPKQAIEPGLVYEIFEVDYLKFLCGNGFDSKSVRGISGNKSDCSKFSTKFSPQDLNYPAMVFEVSPMKPFVIKFQRTVTNVGIANSTYKSEFSAFSVVYVLKSSEKPNVSVEPPELTFRDLNEKKSFIVTVTGGSIPARTGFSSALVWSDGIHKVRSPIVVNVKLPPIPTSN 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7448114 7450687 - CmaCh02G012710.1 Cma02g01271 289022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01271 739 Pfam Peptidase inhibitor I9 32 108 IPR010259 -
Cma02g01271 739 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 731 IPR045051 -
Cma02g01271 739 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
Cma02g01271 739 ProSiteProfiles Serine proteases, subtilase domain profile. 113 573 - -
Cma02g01271 739 Gene3D - 590 731 - -
Cma02g01271 739 Pfam Subtilase family 131 548 IPR000209 GO:0006508|GO:0008236
Cma02g01271 739 Pfam Fibronectin type-III domain 621 728 IPR041469 -
Cma02g01271 739 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Cma02g01271 739 PRINTS Subtilisin serine protease family (S8) signature 189 202 IPR015500 -
Cma02g01271 739 PRINTS Subtilisin serine protease family (S8) signature 510 526 IPR015500 -
Cma02g01271 739 Gene3D Peptidase S8/S53 domain 131 586 IPR036852 GO:0004252|GO:0006508
Cma02g01271 739 ProSitePatterns Serine proteases, subtilase family, serine active site. 511 521 IPR023828 -
Cma02g01271 739 Gene3D - 319 450 - -
Cma02g01271 739 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 31 731 - -
Cma02g01271 739 CDD Peptidases_S8_3 106 546 IPR034197 -
Cma02g01271 739 CDD PA_subtilisin_like 327 443 - -
Cma02g01271 739 SUPERFAMILY Subtilisin-like 109 577 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01271 Cma-Chr2:7448114 Cma04g00183 Cma-Chr4:886209 0 dispersed
Cma02g01270 Cma-Chr2:7445329 Cma02g01271 Cma-Chr2:7448114 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01271 - - cmax:111490708 1028.85