Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01290 ATGGTCGGTCACAAGAGGCGTTTTCTTCCTCTCTTCCTCCTTGTCTCTGTTTCTATCCTCTTCTTCTTGACTCACTTCTACTCTTCCGTTCCCCCTTACTTCCCTTCAAACCCTAACCCTAATTTTGCTCTTACCGGGAGAGTCACCGACCCTAAAACCTCTGGTTTCACTCTAATCGTGAAAGTTCTTGCTTACAATCGCCTCGATTCCGTGTCCCGCTGCCTTCGGTCCATTGCCAATGCGGATTATCTCGCCGACCGCGTACATCTCCATGTTTACATTGATCATTTCCCTCACGATGATGCGCATATCAACCTCAACGAGTCGCATCGGATCTTGCAATTTGTTGATAAACTTGTTTGGAATTTTGGGGAAAAGCTAATTCATTATCGGACGGGGAACGTGGGTTTGCAAGCGCAGTGGTTGGAGGCTTGGTGGCCGAGCTCTGACAATGAGTTTGCTTTCATTGTGGAGGATGATTTGGAGTTATCGCCGCTTTATTATAAGTTCCTGAGGAGTTTAATTTTGATTTATTATTATAACACTTCGAATTATGATCCTTCAATATACGGGGCTTCGCTGCAGCGACCAAGGTTTGTTCCAGGTAAACATGGCAACAAAATAAGGTTGGATGACAGTACCAGATTGTTTTTGTACCAGTTGGTTGGCACTTGGGGTCAGCTTCTCTTTCCAAAGCCTTGGAAGGAGTTTAGATTGTGGTATGATGAGCACAAGGCGAAGGGCATCAAGCCAATACTTGATGGCATGGTGACAACAGGATGGTACAAGAAGATGGGAGAAAGAATATGGACTCCTTGGTTTATCAAATTTATTCATTCTCGTGCCTATTTTAATATCTACACCAATTTTTTACACGAGAGAGCACTGAGTACTTCTCACAGGGATCCTGGTGTAAACTATGGAAAAACAGCTGGTCCTGATTCACACTTACTGGATGGAAGTTCACTTGATTTCAATCTCCTGGAGATGAAGCCTCTAACCGATCTGAAGCGGTATGATTTCTGCTTTAGAGAACTCATTCCTCAAAGAATTGTTAAAAGCAAGAGTGAGCTTGGTTCTGTTCTCCACTTCGTTCAGAAACATGAAAACATAATCATTGTGAGTGTATTTGGCGTATCAGAGTCCACTGTGAGGAATTTTCTTTGCCATTTTGAAAGGCTGAACATAAGAAACTATATTTTGTTGGGCCATGAATCTGAGTTGCTATATGATCTAGCAAGAAGAGGACACCCAGTAATTTATGCAGACCAATTTCTGAAGACTGTCAAAACGTTCAGTTCTACGGCTTCTGAAGGCACCACAGCTGAACTAGTGAAGTTAGTTCTAGCGAAGTTCTACATTGTTAAGTCATGCTTGGAACTTGGGTACAATCCTGGATTGGTAGATGGAAACATGCTTTTTGTCAATGGTGATCCATTCATGGACTCGAGTCTTGCTGACGACATCTTTTGTGGGCAGAGCTTTGAATTTTTCTTCATCAAAGGCTCATCCTCTGCTCATAAGATGTGGACTAGTCATATCGTCCCCGAGGCTGAAGCCATGGTAGAGTCTTTGATGAATAGAGGTGCCTCGTCTAGAGACGACATTAGTTTCGTAGGCATAGCTAATAAGTTATTGGAACAACATGGTGCTAAGTTCAAAAGAGCTGAGAAGATGAGCTTTGTTGTGAATATTGGTAACAATCCTACCAACGCGTCATTAGGTGATGGGAAAAGGCTGCTATTTTGGCCTGCTGATATGAACGTTAATCATGTAGAGAAACGGCTTGAGGAACTGGGTTTTTGGATCATTGATGGTGACTTTTCTTGCAAAGCTGTTGTCTGTAATGGATTGTAG 1857 42.76 MVGHKRRFLPLFLLVSVSILFFLTHFYSSVPPYFPSNPNPNFALTGRVTDPKTSGFTLIVKVLAYNRLDSVSRCLRSIANADYLADRVHLHVYIDHFPHDDAHINLNESHRILQFVDKLVWNFGEKLIHYRTGNVGLQAQWLEAWWPSSDNEFAFIVEDDLELSPLYYKFLRSLILIYYYNTSNYDPSIYGASLQRPRFVPGKHGNKIRLDDSTRLFLYQLVGTWGQLLFPKPWKEFRLWYDEHKAKGIKPILDGMVTTGWYKKMGERIWTPWFIKFIHSRAYFNIYTNFLHERALSTSHRDPGVNYGKTAGPDSHLLDGSSLDFNLLEMKPLTDLKRYDFCFRELIPQRIVKSKSELGSVLHFVQKHENIIIVSVFGVSESTVRNFLCHFERLNIRNYILLGHESELLYDLARRGHPVIYADQFLKTVKTFSSTASEGTTAELVKLVLAKFYIVKSCLELGYNPGLVDGNMLFVNGDPFMDSSLADDIFCGQSFEFFFIKGSSSAHKMWTSHIVPEAEAMVESLMNRGASSRDDISFVGIANKLLEQHGAKFKRAEKMSFVVNIGNNPTNASLGDGKRLLFWPADMNVNHVEKRLEELGFWIIDGDFSCKAVVCNGL 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7568444 7572138 - CmaCh02G012900.1 Cma02g01290 289041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01290 618 SUPERFAMILY Nucleotide-diphospho-sugar transferases 60 303 IPR029044 -
Cma02g01290 618 PANTHER OSJNBA0004B13.7 PROTEIN 1 615 - -
Cma02g01290 618 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 59 306 IPR029044 -
Cma02g01290 618 PANTHER OSJNBA0004B13.7 PROTEIN 1 615 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00494 Cma02g01290 CCT
Cma02g01290 Cma13g00250 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01290 Cma-Chr2:7568444 Cma01g00494 Cma-Chr1:2518773 2.72E-27 transposed
Cma02g01290 Cma-Chr2:7568444 Cma13g00250 Cma-Chr13:2067977 2.24E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01290 - - cmos:111459737 1199.88