Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01337 ATGGAGTCTTCTCACGACGATATCGCCGACGACCTACAGAGCTTGAGCTTCAACTCCACCAACACTAATCGCAGCACCAGCTCTGGCTCCGAGACTACTCTCACCGCCTCCTCCTCCGTTCATATCCCTTCCATTCTCAACAAGCCTCACGCGCCTTCCTCCGACCCTTGCTGGTCAGCTGTTAGCCGGATCCGATCCGAATCGTCTACTCGCCAACTCGCCTTCTCCGACCTTAAGTTCTCGCACCGTCTTGGCTCTGGCGACATTGGCTCCGTCTACCTCGCTGGACTCAAGTCCGCTGGAGATGACGGATGTTTCTTCGCAGCGAAGGTGATGGATAAGAAGGAATTGGCGAGTCGAAGTAAAGAAGGTAGAGCGAGGACTGAGAGGGAGATTTTGGAGTGTTTGGACCATCCGTTTCTTCCAAAGCTCTATGCTAGTATCGACTCGCCGAAATGGCTCTGTCTCTTGACTGAGTTCTGCCACGGCGGCGACCTCCATGTTCTCCGGCAACGGCAGCCTAACAAACGCTTCGGTGAACTCGCCGTGAGATTCTATGCATCAGAGATAGTAGTTGCTATTGAGTACCTTCACATGATGGGGATTGTTTACCGTGATTTGAAGCCGGAAAATGTGCTGGTACGATCGGATGGCCATATCATGCTCACTGATTTTGATCTCTCCTTGAAGTGTGAGGATTCAACAGCGACCCCACAGGTTATCACTGCCAAAAATGCAACAAATGGCACCGCCCGGCCAAAGAACTGCCAAATTGAGGCCCCTCCTTTCACATCATCCTCCTGCATACTTCCAAACTGCATCGTTCCGGCGATGTCGTGTTTCAACCCGAAACGCAAGCGCAAGAAGAAGTCTAGCCACAGCAATGGACCTGAGTTTGTTGCTGAGCCGGTTGACGTCCGGTCCATGTCGTTTGTTGGCACCCACGAGTATTTGGCGCCAGAGATTGTCTCTGGTGAGGGCCATGGAAGTGCAGTGGATTGGTGGACTTTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCCTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAACATAGTGGCCAGAGCCCTTGAGTTTCCTAAAGATCCAGTGGTGCCGACGGCGGCGAAGGACCTCATATCGCAATTACTGGTCAAAGATCCGGCAAGGCGGCTGGGGTCAACAACAGGGTCGTCGGCGATCAAGCACCACTCATTTTTCCAAGGGGTAAATTGGGCATTACTGAGATGTACGTCGCCACCATTCATTCCTCCACCATTTAGTAGAGAAACTGCAACGGATGAAAGCTGCCCAGAGGCCCCAGTGGACTATTATTAA 1350 52.07 MESSHDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSVHIPSILNKPHAPSSDPCWSAVSRIRSESSTRQLAFSDLKFSHRLGSGDIGSVYLAGLKSAGDDGCFFAAKVMDKKELASRSKEGRARTEREILECLDHPFLPKLYASIDSPKWLCLLTEFCHGGDLHVLRQRQPNKRFGELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVITAKNATNGTARPKNCQIEAPPFTSSSCILPNCIVPAMSCFNPKRKRKKKSSHSNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKDPVVPTAAKDLISQLLVKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSRETATDESCPEAPVDYY 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7835428 7840230 - CmaCh02G013370.1 Cma02g01337 289088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01337 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Cma02g01337 449 MobiDBLite consensus disorder prediction 10 34 - -
Cma02g01337 449 Gene3D Phosphorylase Kinase; domain 1 77 164 - -
Cma02g01337 449 ProSiteProfiles Protein kinase domain profile. 78 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g01337 449 SMART serkin_6 78 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g01337 449 Pfam Protein kinase domain 308 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g01337 449 Pfam Protein kinase domain 81 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g01337 449 PANTHER OS11G0150700 PROTEIN 2 449 - -
Cma02g01337 449 Gene3D Transferase(Phosphotransferase) domain 1 165 236 - -
Cma02g01337 449 SUPERFAMILY Protein kinase-like (PK-like) 55 437 IPR011009 -
Cma02g01337 449 Gene3D Transferase(Phosphotransferase) domain 1 307 429 - -
Cma02g01337 449 PANTHER FLIPPASE KINASE 1-RELATED 2 449 - -
Cma02g01337 449 MobiDBLite consensus disorder prediction 1 34 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g01337 Cma20g00178 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01337 Cma-Chr2:7835428 Cma03g00597 Cma-Chr3:5305588 2.03E-146 dispersed
Cma02g01337 Cma-Chr2:7835428 Cma02g01339 Cma-Chr2:7843244 3.52E-135 proximal
Cma02g01337 Cma-Chr2:7835428 Cma20g00178 Cma-Chr20:864044 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68371 PF00069 Pkinase 1.10E-34 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01337 K08286 - csv:101207262 798.505