Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01340 ATGAGGGCGTTGCAATTGCAGCTTAGAGTTGACGCTAATCTTCTAAGTCCATACAGTCATTTCTGTCCTACTTCATCACTAAACCCTTCGTCATTGCTTGTTTGTCAACCTATAAAATTCTCCCATCTCCGAAACTTTAAGCCTTCTCGAAGTTCCCGTGGAACCCATTTCTCTATTCCATCGACTTCTTTCATTGTAGCTTCCATGGCCGATAACGCCCTTCCCACAATCTCAGAGACAGCTACAAAACCTTTCTCTGTGCTCTTTGTGTGCTTGGGAAACATATGCAGAAGCCCAGCTGCTGAAGGAGTATTCAGAGACCTGGTGAAGAAGAGGGGTCTCGATTCCAAGTTCATAATAGATTCTGCTGGCACCATTGGTTACCATGAGGGTAATGAGGCCGACCCAAGAATGAGAGCAGCCTCTAAACGGCGCGGGATAGCGATAACATCCATATCGAGGCCAATCCAGCCATCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTAGGGGCTTTTGAACGATGGAGAATTAAGAATACTCTTCCTCCTGATTCGCATAAGAAGGTCAAATTAATGTGCTCATACTGTAAAAGGCATAATGAAACAGAGGTACCGGATCCTTATTATGGTGGGCAACAAGGTTTTGAGAAGGTTCTGGACTTGCTTGAAGATGCGTGTGAATCACTGTTGGAAAGCATCTTAGCAGAGAACAAGCACTTTTCAGATTAA 759 43.48 MRALQLQLRVDANLLSPYSHFCPTSSLNPSSLLVCQPIKFSHLRNFKPSRSSRGTHFSIPSTSFIVASMADNALPTISETATKPFSVLFVCLGNICRSPAAEGVFRDLVKKRGLDSKFIIDSAGTIGYHEGNEADPRMRAASKRRGIAITSISRPIQPSDFVNFDLILAMDKQNREDILGAFERWRIKNTLPPDSHKKVKLMCSYCKRHNETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHFSD 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7846590 7848738 + CmaCh02G013400.1 Cma02g01340 289091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01340 252 PRINTS LMW phosphotyrosine protein phosphatase signature 87 104 IPR017867 GO:0004725|GO:0006470
Cma02g01340 252 PRINTS LMW phosphotyrosine protein phosphatase signature 130 146 IPR017867 GO:0004725|GO:0006470
Cma02g01340 252 PRINTS LMW phosphotyrosine protein phosphatase signature 214 229 IPR017867 GO:0004725|GO:0006470
Cma02g01340 252 Pfam Low molecular weight phosphotyrosine protein phosphatase 87 240 IPR023485 -
Cma02g01340 252 CDD LMWPTP 86 241 - -
Cma02g01340 252 Gene3D - 70 248 - -
Cma02g01340 252 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 46 248 - -
Cma02g01340 252 SMART LMWPc_2 85 242 IPR023485 -
Cma02g01340 252 SUPERFAMILY Phosphotyrosine protein phosphatases I 83 243 IPR036196 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01340 K25307 - csv:101207515 417.927