Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01537 ATGAAGATTGGAGCGATGGAAGATGTTGCGATAATTGGAGGATTGATTGCAGTGCAGTTCATATACGCTGGAAACTCGGTATTGCTAAGTTATTTGATGTCGTTAGGGCTCAATTCTCTCAACATCGTCATTTATATTGCCTCTGCCACATTTCTATTTTTGGCTCCTCTGGCTGTTTGTTTTGAAAGGAGCAATTGGCCCAAGAAATTGAGTTTCAAGTTGGTGCTGCAGCTTGTTCTGATCTCCTTTGGCGGGGTAACTTTGTTCCAAACTCTGCTATTAGAAGGGATAAAGCTGACTTCTCCAGCCATGGCAACTGCCATGCCAAACATTGCTCCTGGTCTCATCTTTATCATTGCCTGGTGTTTTAGATTAGAGAGAGTCAAACTTAGTTGTCTGTACAGCAAAGTTAAGATTTTAGGGACATTGCTTTGTGTAGTGGGCGCCATCATAATGAGCATACTGCACAGCGCCATCACGATACCGGCAAAAGAGCAGCTAATTTTTCTTCCTTCATCTGTACTCTTCAATAAGGAAAAGTTTATTGGTTGTTTGTATCTCATGATGGCGGTTTTCATATTATCAAGCAATGTTGTATTGCAGGCTACAGCCCTTGGTGAATTACCCGCTCCAATGTCGTTGAGTGCTGTAACTTCGTTCATTGGAGTATTAACGACTGCAGTTGTACAACTACTGAAGAATCATAAGTTAGAAACCGAATGGTCAATTGTCAACATGAAGGATTTACTCTGCTACTCTCTATTGGGAGGAATAGTGAGCGGTACAAGCTTGAGCTTCAACGGGTGGGCAATGAAGAAAAGAGGGCCAGTTTTGGTGTCAATTTTCAGTCCTATTGGAACAGTTTTCTCTGTCATTCTCTCTGTCTTCACCTTAGGAGACACTATTTCCATTGGAAGCCTTGCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCAAAAGGAAAAGATGGTTACTGTGATGGGAGTGGCTATCAAAGTGATGACTTTGATATTGAGAAACCTTTACTCTCTTGA 1047 41.93 MKIGAMEDVAIIGGLIAVQFIYAGNSVLLSYLMSLGLNSLNIVIYIASATFLFLAPLAVCFERSNWPKKLSFKLVLQLVLISFGGVTLFQTLLLEGIKLTSPAMATAMPNIAPGLIFIIAWCFRLERVKLSCLYSKVKILGTLLCVVGAIIMSILHSAITIPAKEQLIFLPSSVLFNKEKFIGCLYLMMAVFILSSNVVLQATALGELPAPMSLSAVTSFIGVLTTAVVQLLKNHKLETEWSIVNMKDLLCYSLLGGIVSGTSLSFNGWAMKKRGPVLVSIFSPIGTVFSVILSVFTLGDTISIGSLAGMFLMFCGLYFVLWAKGKDGYCDGSGYQSDDFDIEKPLLS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8740312 8743476 + CmaCh02G015370.1 Cma02g01537 289288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01537 348 PANTHER WAT1-RELATED PROTEIN 10 348 IPR030184 GO:0016021|GO:0022857
Cma02g01537 348 PANTHER OS11G0588100 PROTEIN 10 348 - -
Cma02g01537 348 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Cma02g01537 348 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020|GO:0016021
Cma02g01537 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 325 - -
Cma02g01537 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01537 Cma-Chr2:8740312 Cma04g02624 Cma-Chr4:17910496 1.56E-47 dispersed
Cma15g01119 Cma-Chr15:7136051 Cma02g01537 Cma-Chr2:8740312 4.93E-18 wgd
Cma02g01537 Cma-Chr2:8740312 Cma06g00788 Cma-Chr6:4113634 5.60E-139 wgd
Cma02g01537 Cma-Chr2:8740312 Cma06g00788 Cma-Chr6:4113634 5.60E-139 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01537 - - csv:101204100 530.02