Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g01607 | ATGGCTGGTTTGGATTTAGGCAATCGCTATATTCACCAACTTCAAAGACCTGATTTCAACCTTCATCACCCGCACCACCACCCCGACACTCAATCTGATCATGAAGACGAATCAGATCAGCCGTTGGATTTCGTCTCCGCCGCCACTGACATGGCGGTCTCTCGCCGTCCCCGTGGCCGTCCAGCTGGCTCCAAAAACAAACCCAAGCCCCCGGTTATCATTACCCGGGAAAGCGCCAATACCCTAAGGGCTCATATTTTTGAAGTTGGAAGCGGCTGCGATGTCTTTGATAGCATCGCCATCTACGCCCGCCGCCGTCAACGGGGGATATGCATCTTGAATGCCAACGGAATGGTAACTAATCTCAACTTACGCCAACCGACGGGGACCGGTGCTGTCTTAAACCTACAAGGGAGGTTCGAGATATTATCGCTTACCGGATCTTTCCTACCGCCGCCTGCTCCTCCCGGCGCTACTAGTTTGACCATATATTTAGCGGGTGGTCAAGGGCAAGTCGTCGGTGGGAATGTTGTCGGAGAGTTGGTGGCAGCCGGGCCAGTAACTGTCATCGTCGCATCGTTTGCAAATGTAGCATACGAGAGACTCCCACTCGAAGAACAAGAACAAGAACAAGAACAAGATCAGATGCAGCCACCAACGTCGGAGGGCGGTGGAGGCAGGGGAGGCCCATTTCCAGATCCATCTTCAGGGCTTCCTTTCTTCAATTTGCCTCTAAATATGCCGAACCACATTCAGCTACCATTCTAA | 768 | 52.47 | MAGLDLGNRYIHQLQRPDFNLHHPHHHPDTQSDHEDESDQPLDFVSAATDMAVSRRPRGRPAGSKNKPKPPVIITRESANTLRAHIFEVGSGCDVFDSIAIYARRRQRGICILNANGMVTNLNLRQPTGTGAVLNLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTVIVASFANVAYERLPLEEQEQEQEQDQMQPPTSEGGGGRGGPFPDPSSGLPFFNLPLNMPNHIQLPF | 255 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9151665 | 9152432 | + | CmaCh02G016070.1 | Cma02g01607 | 289358 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g01607 | 255 | ProSiteProfiles | PPC domain profile profile. | 79 | 216 | IPR005175 | - | |
Cma02g01607 | 255 | MobiDBLite | consensus disorder prediction | 18 | 39 | - | - | |
Cma02g01607 | 255 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 83 | 195 | IPR005175 | - | |
Cma02g01607 | 255 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 79 | 208 | - | - | |
Cma02g01607 | 255 | MobiDBLite | consensus disorder prediction | 53 | 72 | - | - | |
Cma02g01607 | 255 | CDD | DUF296 | 83 | 166 | IPR005175 | - | |
Cma02g01607 | 255 | Gene3D | - | 82 | 215 | - | - | |
Cma02g01607 | 255 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 1 | 254 | IPR014476 | GO:0003680 | |
Cma02g01607 | 255 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN | 1 | 254 | - | - | |
Cma02g01607 | 255 | MobiDBLite | consensus disorder prediction | 206 | 239 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g01607 | Cma-Chr2:9151665 | Cma14g01956 | Cma-Chr14:13756219 | 5.00E-97 | dispersed | |
Cma16g01151 | Cma-Chr16:8853135 | Cma02g01607 | Cma-Chr2:9151665 | 2.27E-91 | wgd | |
Cma19g00242 | Cma-Chr19:1713777 | Cma02g01607 | Cma-Chr2:9151665 | 4.17E-119 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g01607 | - | - | cmo:103503535 | 388.652 |