Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01659 ATGTTTGATTTCATCATTTTCTTCTTCTTTATTCTCCTGGCTCCTTGCAAATCTTCTGAAATTTCTTCAGCTTCTCGGAGATTGCTTCACCAGCCCTTTTTCCCGTATGATTCTGTGCCTCCGGCGGAGCTCCCGTCGCTTCCGGTACCACCACCGCCGGATCCCAAATACCCATTTTCCACTACCCCTCCTGCAACTCCGGATGGGTCTCCATTCTTTCCGACGTATCCAGGAACTCCTCCTCCGCCCACGCCTGCGAGCATTGCAACGTTTCCGGCGAATATTTCTTCTCTGATTCTCCCTCGTTCGTCTCCGTCTGGTTCCAGTTCTAAGAAGCTTGTTCCATTGGTTGTTGCTGCGGTTGTTTCTGTTGTTTTGGTTGTTTGCATTGCTGGGTTTTTGTACTGGCGGCGGCGTAGCCGCCGTGGGTTGGCTGAGGATAAGACGTTCAGATCCGAAAGTAGTAGCCGCTTGTGTCCGGTTCCGAGTGTTGAAGTCGGTAATGGAATTCCTAAGTTGAGGCATCCTTCTGCTTCTAGCTCTGAGTTTCTGTATTTGGGTACTCTTGTGAACTCGAGAGGAATCAACGATCGTTCCGTTGGGGGAGCTCGTGTGGCTGATCCTAGGCCGTTGGATTCGCCGGAACTTCATCCGCTTCCGCCGCTGAACTTCGGTCGGTCGAATGAGAAGCAAAATGGTGGAAATGGAGATGAGAGATCGATGGGAGATGAAGAGGAGGAGGAATTTTATTCTCCTAAAGGTTCTCTCGGCGCGATTGGCTCGGGATCTCGAAGAGTGTTCGCAACAATGGCGGCTGAAGATTTGCTTGGCAAAACCAGTGATTCGAGCTCCACTTCGTATTCCACATCCAGCGGTTCGGTTTCGCCGGCGAGATCACGTTCTAAGAGTCTTTCTGTATCTCCACCGGCGAGTTTGAGCCCTAGAAGATCTGTTCAAAATGACTCTTCTCATTTCTCTGTTTCTGCTACTGTAGCGACGGAGCAGCTTTCGCCACCATTGACGCCGCCTCTTTCCCACGGCGGAGGGGAATCGGACGATGGCGGCAAATCTCATTGCCCTTCTCCATTGCGTTTATCGACGGAGAAAGCTCCGGAGAAGAGCTCCACCGCATCTTCCTCCCGGAGATTTTCTAATGTTTCAGTTCACAGTGCGATGTTACCAATTTCAGCAACCAACAAGGATTTGGATAATCATGATGAAACGAACAATAATTACGAAGAACAATCTCCAAGACAATCACATAGTTCAGATCCTGATCAGTTTCCTTCTTCTCCTTGTTTATCTCCACTTTCCGATGGAATTTTGGGGAAAATTCAAATTCAATCACCGACAGTTTCAAACGTTTGCGGCTCGGATTCTGATGCGAAATCTAAGCAACTTCCTTACTCATTTACTTCATCTTCACCTTCATCATCACCGGAGAGAGTAGTTCTGGACTCATCTCCGTCAAGAACATCCATTATTTCCGATCAAAACAGGTCGTCACCGTCACCACCATCACCGGAGAGAATTCTGATGAGTGATTCAGATTCATCAAGGAGAACTTTTGACCACTTTGATCAAGATGTTCAATCTTCTTCTGCAGACATCACTTCTACTGATGTGGATCGACTGCAATCTCCTTCGGGCGTTCCTGCCGCTCCTCCGCCACCGCCACCGCCACCACCACTTGCAGCACCTCCTCTGCCTATACGTTGTGAAATGCCCATTTCACCTTCAACACCAATAGGCCAATCCATTCCAATGGCGCCTCCTCCATTAGTGCCTCCATTAAGGCCATTTATAATAGAGACTGTGAAAAATGTCTCACCAGTTCAGCTGCCTTCCTGCAATGGTGAATCATCTGAAGACACTCCAAAGCCCAAGTTGAAGCCATTGCATTGGGACAAAGTGAGGGCGAGCTCCGATCGCGAGATGGTGTGGGATCAGCTCAGATCAAGCTCTTTTAAAGTGAACGAGGAAATGATAGAAACTCTGTTTGTTGTGAACACTTCCAACTCGAAGGAAACAACTCCACGCCCCATGCTTCCTACACCTAACCAAGAGATCGGAGTTCTCGATCCCAAAAAGTCGCAGAACATCGCCATTGCGCTACGGGCACTTAATGTGACCATAGAAGAAGTTTGTGAAGCTCTTTTAGAAGGTAATGCTGATGCACTTGGATTGGACCTACTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAGCTAAAGGCATCCAAGGATGTCTCACCTACCAAGCTTGGCCCTGCTGAGAAATTTTTGAAGGCAGTTCTTGATGTTCCTTTTGCGTTTAAAAGGGTGGATGCGATGCTTTACATGGCAAACTTTGAGTCCGAGATCGAGTACTTAAAGAAGTCGTTTGAAAATCTCGAGACTGCCTGCGAGGAATTGAGGAATAGCAGGATGTTCTTGAAACTCTTGGAAGCTGTGCTCAAAACGGGGAATCGCATGAACGTTGGCACGAATCGTGGGGAGGCACAAGCCTTCAAACTCGACACACTTCTAAAGCTCGTCGATGTCAAGGGTGCAGATGGAAGAACCACTCTCCTACATTTTGTTGTACAAGAAATCATCAGAAGTGAAGGAGCTCGTCTTTGTAGCATGAGCCAACCTCCAAACTCCAACCTGAGCGACGATGTCAAATGCAGGAAAATCGGCCTGCAAGTTGTTTCAGGTCTCAGCTCGGAACTCGCCAATGTGAAGAAAGCAGCATCAATGGATTCCGATGTGCTCAGCGGGGAGGTCATCAAGCTTTCTAGAGGACTCGACAACATCAGGGAGGCTCTGTGTTTAAACGAAGCAGCGGGGACAAATCAAAGCACAGAAAAGTTTTCCGAGTCGATGAATAGATTCTTGAACATGGCAGAAGTGGAAATCATCAGAATTCAAGCCCATGAAAGCGTTGCATTATCTCTAGTAAAGGAGATCACAGAGTACTTCCATGGCAACTCTGCCAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTGAGAGATTTCCTAACGATCCTGGACAGGGTCTGCAAGGAAGTCGGGATGGTAAACGAGCGAACGATCGTGAGTTCGGCACATAAATTTCCAGTTCCAGTGAATCCAACAGTACCACAAGCATTTCAAGCTCATCAAAAAGTGCAGAAATACAGTTCATCTGATGAAGAAAGTGGATAA 3207 47.46 MFDFIIFFFFILLAPCKSSEISSASRRLLHQPFFPYDSVPPAELPSLPVPPPPDPKYPFSTTPPATPDGSPFFPTYPGTPPPPTPASIATFPANISSLILPRSSPSGSSSKKLVPLVVAAVVSVVLVVCIAGFLYWRRRSRRGLAEDKTFRSESSSRLCPVPSVEVGNGIPKLRHPSASSSEFLYLGTLVNSRGINDRSVGGARVADPRPLDSPELHPLPPLNFGRSNEKQNGGNGDERSMGDEEEEEFYSPKGSLGAIGSGSRRVFATMAAEDLLGKTSDSSSTSYSTSSGSVSPARSRSKSLSVSPPASLSPRRSVQNDSSHFSVSATVATEQLSPPLTPPLSHGGGESDDGGKSHCPSPLRLSTEKAPEKSSTASSSRRFSNVSVHSAMLPISATNKDLDNHDETNNNYEEQSPRQSHSSDPDQFPSSPCLSPLSDGILGKIQIQSPTVSNVCGSDSDAKSKQLPYSFTSSSPSSSPERVVLDSSPSRTSIISDQNRSSPSPPSPERILMSDSDSSRRTFDHFDQDVQSSSADITSTDVDRLQSPSGVPAAPPPPPPPPPLAAPPLPIRCEMPISPSTPIGQSIPMAPPPLVPPLRPFIIETVKNVSPVQLPSCNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNSKETTPRPMLPTPNQEIGVLDPKKSQNIAIALRALNVTIEEVCEALLEGNADALGLDLLESLLKMAPTKEEERKLKASKDVSPTKLGPAEKFLKAVLDVPFAFKRVDAMLYMANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGEAQAFKLDTLLKLVDVKGADGRTTLLHFVVQEIIRSEGARLCSMSQPPNSNLSDDVKCRKIGLQVVSGLSSELANVKKAASMDSDVLSGEVIKLSRGLDNIREALCLNEAAGTNQSTEKFSESMNRFLNMAEVEIIRIQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDRVCKEVGMVNERTIVSSAHKFPVPVNPTVPQAFQAHQKVQKYSSSDEESG 1068
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9391890 9396032 + CmaCh02G016590.1 Cma02g01659 289410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01659 1068 SMART it6_source 620 1032 IPR015425 -
Cma02g01659 1068 Coils Coil 395 415 - -
Cma02g01659 1068 MobiDBLite consensus disorder prediction 277 340 - -
Cma02g01659 1068 MobiDBLite consensus disorder prediction 197 257 - -
Cma02g01659 1068 PANTHER FORMIN-LIKE PROTEIN 1 5 1067 - -
Cma02g01659 1068 MobiDBLite consensus disorder prediction 413 434 - -
Cma02g01659 1068 MobiDBLite consensus disorder prediction 442 513 - -
Cma02g01659 1068 MobiDBLite consensus disorder prediction 528 546 - -
Cma02g01659 1068 MobiDBLite consensus disorder prediction 368 394 - -
Cma02g01659 1068 MobiDBLite consensus disorder prediction 550 569 - -
Cma02g01659 1068 Pfam Formin Homology 2 Domain 622 1017 IPR015425 -
Cma02g01659 1068 ProSiteProfiles Formin homology-2 (FH2) domain profile. 620 1043 IPR015425 -
Cma02g01659 1068 Gene3D Formin, FH2 domain 619 1027 IPR042201 -
Cma02g01659 1068 PANTHER FORMIN-RELATED 5 1067 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cma02g01659 1068 SUPERFAMILY Formin homology 2 domain (FH2 domain) 555 1026 - -
Cma02g01659 1068 MobiDBLite consensus disorder prediction 277 569 - -
Cma02g01659 1068 Coils Coil 785 812 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00531 Cma-Chr2:2928979 Cma02g01659 Cma-Chr2:9391890 1.06E-163 dispersed
Cma02g01659 Cma-Chr2:9391890 Cma04g01882 Cma-Chr4:9679017 6.42E-10 dispersed
Cma19g00185 Cma-Chr19:1217972 Cma02g01659 Cma-Chr2:9391890 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01659 - - bhj:120077761 1484.16