Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g01681 | ATGTTAAGATTCATGATCACAACAACCCCACTTTCCACTTCCCTTCAAAACCTCAAGAAACAGAGCCCTTTTGGTGCAAGAGGAAAACAGGAAAGAATTGTCTGCCACTGCCAGATTACACAAACTTCTCTATCTCTATCTCTATCTCTCTCCCTCTTCCAAGCTGCGACGATGGTTGGTAGCACCTTGTTCACTTTGGCTGAGGTTGCCTCCCACGACAACCGCAACGACTGCTGGTTGATCATTGAGGACAAGGTGTACGATGTAACAAAGTTCCTTGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGCCATTGGTAAGGATGCAACCAATGATTTTTTCGATGTCGGGCACAGTAGCACTGCTCGAGCGATGATGGAAGAATTTTACGTAGGCGACATCGATAGCTCAACTATCCCTACAAAAAGGAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACCAGAGTTCATTATCAAGGTCCTCCAGTTTCTAGCTCCCCTGGTAATTTTGGCATTGGCTTTTGGCATCCATCTCTATACCAAAACAACATGA | 573 | 45.55 | MLRFMITTTPLSTSLQNLKKQSPFGARGKQERIVCHCQITQTSLSLSLSLSLFQAATMVGSTLFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFFDVGHSSTARAMMEEFYVGDIDSSTIPTKRKYTPPKQPLYNQDKTPEFIIKVLQFLAPLVILALAFGIHLYTKTT | 190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9474696 | 9477412 | + | CmaCh02G016810.1 | Cma02g01681 | 289432 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g01681 | 190 | PANTHER | CYTOCHROME B5 | 61 | 188 | - | - | |
Cma02g01681 | 190 | Gene3D | - | 58 | 142 | IPR036400 | - | |
Cma02g01681 | 190 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 61 | 137 | IPR001199 | - | |
Cma02g01681 | 190 | SMART | Cyt_b5_2 | 64 | 137 | IPR001199 | - | |
Cma02g01681 | 190 | PRINTS | Cytochrome B5 signature | 96 | 110 | IPR001199 | - | |
Cma02g01681 | 190 | PRINTS | Cytochrome B5 signature | 86 | 96 | IPR001199 | - | |
Cma02g01681 | 190 | PRINTS | Cytochrome B5 signature | 124 | 136 | IPR001199 | - | |
Cma02g01681 | 190 | PRINTS | Cytochrome B5 signature | 111 | 118 | IPR001199 | - | |
Cma02g01681 | 190 | PANTHER | - | 61 | 188 | - | - | |
Cma02g01681 | 190 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 92 | 99 | IPR018506 | GO:0020037 | |
Cma02g01681 | 190 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 62 | 147 | IPR036400 | - | |
Cma02g01681 | 190 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 65 | 136 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g01681 | Cma-Chr2:9474696 | Cma06g01244 | Cma-Chr6:8291203 | 1.66E-66 | dispersed | |
Cma12g01271 | Cma-Chr12:9906853 | Cma02g01681 | Cma-Chr2:9474696 | 5.27E-20 | transposed | |
Cma14g01890 | Cma-Chr14:13376466 | Cma02g01681 | Cma-Chr2:9474696 | 4.06E-67 | wgd | |
Cma17g00107 | Cma-Chr17:521732 | Cma02g01681 | Cma-Chr2:9474696 | 1.30E-62 | wgd | |
Cma19g00162 | Cma-Chr19:1082126 | Cma02g01681 | Cma-Chr2:9474696 | 5.57E-88 | wgd | |
Cma02g01681 | Cma-Chr2:9474696 | Cma06g01226 | Cma-Chr6:8175526 | 8.97E-06 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g01681 | K23490 | - | csv:101212882 | 254.988 |