Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01711 ATGCCTTTCTCGATTGCGCACCTTCTTCTGGTTCTTCATGCGGCCAATTTGGTTTTTTCTTGCTCAGGACAATCTTCACCACACATATACTTATCTCCTTCCTTAGAGCCAAACCTGGAAACAACAATGGCAGAAATGTCAACAGAGCATGTAAGTTCAGAGCCGATGAGTTTTTCATTTGTGCCCTCAAAATTACATGGTAACTGGATGTTTAAGCCATCGTCAGGACCATTGACTGCTCCTGCACCTTCTCCAGGTCCTATAGTTGCACCTTTACCTATCCGACATCATCGATGGCGTCGTAAACGACCTCATGTGGTTGCTCCTACCCCGTCAAAAGATCAAGGTTGTGATCAAATATGCATGGAGCCTCTTACTGCGGCACCCTTTGGTTCACCTTGCGGCTGTGTATTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTTCCTGTGATGAACGAGCTTGAAATTGAGATTGCAGAGGGGACTTACTTGGAGCAAAGCCAAGTGAAAATCATGGGTGCAAATGCAGATAGTCAAAATCAGGGAAAAACTGTGGTGGAGATAAATTTAGTGCCTCTGGGAGAGAAATTTGATAATACCACTGCAGTACTGACTTACAGAAGATTTTGCGATAAAAAAGTGCATCTAAATATGACGCTTTTTGGTGATTATGAAGTTGTGTACATCAGCTATCCAGGGATTCCTTCTTCACCGCCATATGGAGGTTACATGGGAAGTGCTCCTAGTGGAAGTGCTGGAGATCTTCCCATTACTGCAAATTTCGTTAATAAGAGCCAGAAGATGAATGTTAAAATAATTGCCGTCATAGCACTTTCAGCATTTGTTGTGTTATTGGTGTTCATTGGAGCTCTTTCCATCTTTTTTAAATGGAGAAAGGTTGGCAGACCGTCTAGTGCTGTTGGCCCTGTCTTCACGTCATCAATTAACAAAAGATCTGGTCTAGGATCAGCCTTATCAAGTAGCATTGCTTGCTCCACATCTGTTTCCCTAATGTCCACGATGCCAACCAGTATTCAATCTGTTAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGATAAATTTAGTTCGAAAAGGATTTTAGGCGAAGGGGGATTTGGCCGGGTTTACTTTGGTCTTCTGGAAGATGGAAATGAAGTTGCGGTTAAGTTGCTTACACGGGATAATCAGAATGGAGACCGTGAATTTATTGCGGAAGTTGAGATGTTGAGTAGACTGCACCATCGGAATCTTGTGAAACTGATTGGGATATGCATTGACGGGCGAACTCGCTGCTTAGTTTATGAGCTTGTCCATAATGGAAGTGTTGAGTCCCACTTGCACGGCATTGACAAGAGAAAGGGACCCCTTGACTGGGATGCGCGGTTAAAGATTGCCCTTGGAGCAGCAAGAGGTTTGGCATATCTTCACGAAGATTCTAACCCCCGTGTAATTCACCGCGATTTCAAGGCAAGTAATGTTTTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAGGCAACTGAAGGAAGTGAACATATCTCAACACGGGTGATGGGAACTTTTGGGTATGTAGCCCCTGAATATGCAATGACAGGGCACCTACTCGTCAAGAGTGATGTTTACAGCTATGGAGTTGTGCTACTTGAGCTTCTTTCGGGAAGAAAACCAGTGGACATGTCCCAGCCACACGGTGAGGAGAACCTTGTAACATGGGCTAGGCCTCTACTAACCAGTAGAGAAGGTTTGGAGCAACTAGTAGATCCTTCTCTAGCTGGTAGTTATGACTTTGATGACATGGCCAAGGTGGCTGCCATTGCTTCCATGTGCGTTCATCCAGAGGTGACCCAGAGGCCATTCATGGGAGAAGTTGTGCAGGCTCTGAAGCTGATATACAACGACACAGATGAGACGTGCGCAGACTACTGCAGCCAAAAGGAGTCCTCAGCTCAGGAATCGGATTTCAAAGGCGATCTTGTACCATCAGATAGCAGTTGGTGGAATGCTGGTGGTCTCACACCTCGACTGACATATGGTCAAGCTTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCCCTTGAAGATATAGAAAACCGACTGTTTTCAACTTCAAGTTTGGTGGGCGATGAGATATCCTTGCCCATTCGGCATGGAAACAGGTCAGGTCCCTTACGAACTGCTCGAAGCAAGCCTGCCTTTTATAGATTGTCGGGAAGTAGGAGCGAGCATGGAGGATTTCTTTCAAGGCCTTCTTGGAACAACAATGGGTTTTGGGTTTGA 2322 45.18 MPFSIAHLLLVLHAANLVFSCSGQSSPHIYLSPSLEPNLETTMAEMSTEHVSSEPMSFSFVPSKLHGNWMFKPSSGPLTAPAPSPGPIVAPLPIRHHRWRRKRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELEIEIAEGTYLEQSQVKIMGANADSQNQGKTVVEINLVPLGEKFDNTTAVLTYRRFCDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQKMNVKIIAVIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTSSINKRSGLGSALSSSIACSTSVSLMSTMPTSIQSVKTFALSELEKATDKFSSKRILGEGGFGRVYFGLLEDGNEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIDGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSAQESDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEDIENRLFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRLSGSRSEHGGFLSRPSWNNNGFWV 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9635413 9640256 - CmaCh02G017110.1 Cma02g01711 289462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01711 773 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 41 769 - -
Cma02g01711 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Cma02g01711 773 SUPERFAMILY Protein kinase-like (PK-like) 346 644 IPR011009 -
Cma02g01711 773 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Cma02g01711 773 PANTHER OS01G0750732 PROTEIN 41 769 - -
Cma02g01711 773 ProSiteProfiles Protein kinase domain profile. 369 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma02g01711 773 CDD STKc_IRAK 375 644 - -
Cma02g01711 773 Gene3D Transferase(Phosphotransferase) domain 1 445 668 - -
Cma02g01711 773 Gene3D Phosphorylase Kinase; domain 1 340 444 - -
Cma02g01711 773 Pfam Protein tyrosine and serine/threonine kinase 372 640 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g01711 Cma19g00126 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01711 Cma-Chr2:9635413 Cma10g00720 Cma-Chr10:3251540 0 dispersed
Cma19g00126 Cma-Chr19:744556 Cma02g01711 Cma-Chr2:9635413 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68381 PF07714 PK_Tyr_Ser-Thr 1.20E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01711 - - csv:101203278 1360.9