Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g01711 | ATGCCTTTCTCGATTGCGCACCTTCTTCTGGTTCTTCATGCGGCCAATTTGGTTTTTTCTTGCTCAGGACAATCTTCACCACACATATACTTATCTCCTTCCTTAGAGCCAAACCTGGAAACAACAATGGCAGAAATGTCAACAGAGCATGTAAGTTCAGAGCCGATGAGTTTTTCATTTGTGCCCTCAAAATTACATGGTAACTGGATGTTTAAGCCATCGTCAGGACCATTGACTGCTCCTGCACCTTCTCCAGGTCCTATAGTTGCACCTTTACCTATCCGACATCATCGATGGCGTCGTAAACGACCTCATGTGGTTGCTCCTACCCCGTCAAAAGATCAAGGTTGTGATCAAATATGCATGGAGCCTCTTACTGCGGCACCCTTTGGTTCACCTTGCGGCTGTGTATTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTTCCTGTGATGAACGAGCTTGAAATTGAGATTGCAGAGGGGACTTACTTGGAGCAAAGCCAAGTGAAAATCATGGGTGCAAATGCAGATAGTCAAAATCAGGGAAAAACTGTGGTGGAGATAAATTTAGTGCCTCTGGGAGAGAAATTTGATAATACCACTGCAGTACTGACTTACAGAAGATTTTGCGATAAAAAAGTGCATCTAAATATGACGCTTTTTGGTGATTATGAAGTTGTGTACATCAGCTATCCAGGGATTCCTTCTTCACCGCCATATGGAGGTTACATGGGAAGTGCTCCTAGTGGAAGTGCTGGAGATCTTCCCATTACTGCAAATTTCGTTAATAAGAGCCAGAAGATGAATGTTAAAATAATTGCCGTCATAGCACTTTCAGCATTTGTTGTGTTATTGGTGTTCATTGGAGCTCTTTCCATCTTTTTTAAATGGAGAAAGGTTGGCAGACCGTCTAGTGCTGTTGGCCCTGTCTTCACGTCATCAATTAACAAAAGATCTGGTCTAGGATCAGCCTTATCAAGTAGCATTGCTTGCTCCACATCTGTTTCCCTAATGTCCACGATGCCAACCAGTATTCAATCTGTTAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGATAAATTTAGTTCGAAAAGGATTTTAGGCGAAGGGGGATTTGGCCGGGTTTACTTTGGTCTTCTGGAAGATGGAAATGAAGTTGCGGTTAAGTTGCTTACACGGGATAATCAGAATGGAGACCGTGAATTTATTGCGGAAGTTGAGATGTTGAGTAGACTGCACCATCGGAATCTTGTGAAACTGATTGGGATATGCATTGACGGGCGAACTCGCTGCTTAGTTTATGAGCTTGTCCATAATGGAAGTGTTGAGTCCCACTTGCACGGCATTGACAAGAGAAAGGGACCCCTTGACTGGGATGCGCGGTTAAAGATTGCCCTTGGAGCAGCAAGAGGTTTGGCATATCTTCACGAAGATTCTAACCCCCGTGTAATTCACCGCGATTTCAAGGCAAGTAATGTTTTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAGGCAACTGAAGGAAGTGAACATATCTCAACACGGGTGATGGGAACTTTTGGGTATGTAGCCCCTGAATATGCAATGACAGGGCACCTACTCGTCAAGAGTGATGTTTACAGCTATGGAGTTGTGCTACTTGAGCTTCTTTCGGGAAGAAAACCAGTGGACATGTCCCAGCCACACGGTGAGGAGAACCTTGTAACATGGGCTAGGCCTCTACTAACCAGTAGAGAAGGTTTGGAGCAACTAGTAGATCCTTCTCTAGCTGGTAGTTATGACTTTGATGACATGGCCAAGGTGGCTGCCATTGCTTCCATGTGCGTTCATCCAGAGGTGACCCAGAGGCCATTCATGGGAGAAGTTGTGCAGGCTCTGAAGCTGATATACAACGACACAGATGAGACGTGCGCAGACTACTGCAGCCAAAAGGAGTCCTCAGCTCAGGAATCGGATTTCAAAGGCGATCTTGTACCATCAGATAGCAGTTGGTGGAATGCTGGTGGTCTCACACCTCGACTGACATATGGTCAAGCTTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCCCTTGAAGATATAGAAAACCGACTGTTTTCAACTTCAAGTTTGGTGGGCGATGAGATATCCTTGCCCATTCGGCATGGAAACAGGTCAGGTCCCTTACGAACTGCTCGAAGCAAGCCTGCCTTTTATAGATTGTCGGGAAGTAGGAGCGAGCATGGAGGATTTCTTTCAAGGCCTTCTTGGAACAACAATGGGTTTTGGGTTTGA | 2322 | 45.18 | MPFSIAHLLLVLHAANLVFSCSGQSSPHIYLSPSLEPNLETTMAEMSTEHVSSEPMSFSFVPSKLHGNWMFKPSSGPLTAPAPSPGPIVAPLPIRHHRWRRKRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELEIEIAEGTYLEQSQVKIMGANADSQNQGKTVVEINLVPLGEKFDNTTAVLTYRRFCDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQKMNVKIIAVIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTSSINKRSGLGSALSSSIACSTSVSLMSTMPTSIQSVKTFALSELEKATDKFSSKRILGEGGFGRVYFGLLEDGNEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIDGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSAQESDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEDIENRLFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRLSGSRSEHGGFLSRPSWNNNGFWV | 773 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9635413 | 9640256 | - | CmaCh02G017110.1 | Cma02g01711 | 289462 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g01711 | 773 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 | 41 | 769 | - | - | |
Cma02g01711 | 773 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 491 | 503 | IPR008271 | GO:0004672|GO:0006468 | |
Cma02g01711 | 773 | SUPERFAMILY | Protein kinase-like (PK-like) | 346 | 644 | IPR011009 | - | |
Cma02g01711 | 773 | ProSitePatterns | Protein kinases ATP-binding region signature. | 375 | 397 | IPR017441 | GO:0005524 | |
Cma02g01711 | 773 | PANTHER | OS01G0750732 PROTEIN | 41 | 769 | - | - | |
Cma02g01711 | 773 | ProSiteProfiles | Protein kinase domain profile. | 369 | 644 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma02g01711 | 773 | CDD | STKc_IRAK | 375 | 644 | - | - | |
Cma02g01711 | 773 | Gene3D | Transferase(Phosphotransferase) domain 1 | 445 | 668 | - | - | |
Cma02g01711 | 773 | Gene3D | Phosphorylase Kinase; domain 1 | 340 | 444 | - | - | |
Cma02g01711 | 773 | Pfam | Protein tyrosine and serine/threonine kinase | 372 | 640 | IPR001245 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma02g01711 | Cma19g00126 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g01711 | Cma-Chr2:9635413 | Cma10g00720 | Cma-Chr10:3251540 | 0 | dispersed | |
Cma19g00126 | Cma-Chr19:744556 | Cma02g01711 | Cma-Chr2:9635413 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68381 | PF07714 | PK_Tyr_Ser-Thr | 1.20E-45 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g01711 | - | - | csv:101203278 | 1360.9 |