Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma02g01716 ATGGATTTCAACTCCCAAATGCTTCTTCTTTCAACCCTTTTCCTCTGTTTTCTTTCACTTCAAGTTCAAGCAAACACTTCCACTCTTCAAACTTACATAATTCAACTCCATCCACAGGGATTAACCAGCTCTCCCTTTTATTCTAAGCGTCAATGGCATCTTTCTTTTCTTGAACAAACTCTATCTGCTGAAGAAGACTCTTCTTCTCGATTGCTTTACTCATATTCTAACGCCATGGAAGGATTTGCAGCTCAGTTATCTGAAACTGAGATTGAGTATTTGAAGAAATTGCCTGATGTTGTGGCTGTGAGAGCTGATAAAAAATATGAAATTCAAACTACTTATTCTCCTAAGTTTTTGGGGCTTAGTTTAGGCTCACAAGGTGTTTGGTTTAATTCCGCAATGGGCGAAGGAGCAATTGTTGGGGTTCTTGACACTGGAGTTTGGCCTGAGAGTCCAAGCTTTAGTGATTCCAGAATGCCCTCAATTCCTCAAAAATGGCGAGGGGCTTGCCAAGAAGGCCAAGATTTTAACTCCTCAAATTGTAACAAGAAACTCATTGGCGCCAAGTTCTTTATCAAAGGACACCATGTGGCTTCATCCCCGCCATCTGATGTTGACCAGGAGTATGTCTCCCCAAGAGACTCCCATGGCCATGGAACTCACACATCTTCTACAGCTGCGGGAGCTTCGGTCGCCGAAGCGAGCGTGTTTGGTAACGGAGCTGGCGTGGCGCAAGGGATGGCCCCAAGAGCTCACATTGCGGTGTACAAAGTTTGCTGGTTCAGTGGCTGCTATAGCTCTGATATTGTAGCAGCCATGGATGCTGCAATAAGGGATGGTGTTGACATTCTCTCCCTTTCGCTTGGTGGCTTCCCGCTTCCATTTTTCGACGACAGTATCGCCATCGGAAGCTTTCGAGCAATGCAGCATGGCATCTCAGTCAACTGCGCGGCAGGAAACAATGGTCCAATTCAAAGCTCTGTTGCCAATGTAGCTCCTTGGATCACCACCATTGGTGCAAGCACACTCGACCGAAGATTCCCGGCTATCGTTCGACTAAGCAATGGGGAATTCATTTACGGCGAATCAATGTACCCTGGCAACAAGTTCAAGCATGCTACCAAAGAGCTTGAAGTGGTTTACTTGACTGGAGGCCAAATGGGAGGTGAACTTTGCTTAAAAGGGTCTCTTCCAAGAGAACAAGTAGAAGGAAAAATCGTGCTCTGCGACCGTGGCGTCAACGGCAGATCCGAAAAAGGGCAGATTGTGAAGGAATCTGGAGGAGCTGCCATGATCCTTGCAAATACAGAGATAAATCTAGAGGAAGACTTGGTTGATGTTCATGTTTTACCGGCCACATTGATCGGATTTTCCGAGGCGAATCGGTTAAAAGCTTACATGAACACAACAAGCAATCCAAAAGCAAGAATCCAATTTGGAGGAACTGTGATAGGAAGATCAAGAGCTCCATCTGTAGCTCAGTTTTCATCAAGAGGACCAAGCCTTACCAATCCTTCAACGCTCAAACCTGATGTAATTGCTCCTGGGGTCAACATTATAGCAGCTTGGCCACAAAATCTTGGTCCAACTGGCCTTCCAGAAGATTCTAGAAGGTCAAACTTCACTGTCATGTCAGGAACATCCATGGCTTGTCCCCATGTCAGTGGAATTGCGGCTCTAATCCATTCAGCTCATCCAAAATGGACACCAGCAGCCATTAAATCAGCCATAATGACAACCGCTGAGGTTACTGATCATTATGGTAAGCCAATTCTTGATGGCAGCAAACCAGCTGGCGTTTTTGCAATGGGAGCTGGTCATATAAACCCAACCAAAGCAATTGATCCTGGTTTAGTTTATGATATAAAGCCATATGAATATGTCATTCATCTTTGTGCTCTTGGATACACTCATTCAGAAATCTTCATCATAACCCACATGAATGTGAGTTGCCATAAGGTTTTGCAGATGAACAAAGGCTTCAGCTTGAACTATCCTTCCATGTCCGTCGTTTTTAAGCACAAGACGACAAGTAAGGCGGTTTCGAGACGGTTGACGAATGTGGGGAGCCCGAATTCCATCTACTCAGTGGAAGTAACAGCACCCAAAGGCGTTCAAGTTCGAGTCAAGCCTCGGCGCTTGGTGTTCAAATATGTTAACCAAAGTTTAAATTATAAGGTATGGTTTATGTCTGAGAAGGGAAAAGAAGGAAGAAAAGTGAGCTCTTCAGAGGGGCATTTGACATGGGTTCATTCGGAGAATGGGAAATACAAAGTTAGAAGCCCAATTGTGGTGACTTGGAAGAATTGA 2313 44.88 MDFNSQMLLLSTLFLCFLSLQVQANTSTLQTYIIQLHPQGLTSSPFYSKRQWHLSFLEQTLSAEEDSSSRLLYSYSNAMEGFAAQLSETEIEYLKKLPDVVAVRADKKYEIQTTYSPKFLGLSLGSQGVWFNSAMGEGAIVGVLDTGVWPESPSFSDSRMPSIPQKWRGACQEGQDFNSSNCNKKLIGAKFFIKGHHVASSPPSDVDQEYVSPRDSHGHGTHTSSTAAGASVAEASVFGNGAGVAQGMAPRAHIAVYKVCWFSGCYSSDIVAAMDAAIRDGVDILSLSLGGFPLPFFDDSIAIGSFRAMQHGISVNCAAGNNGPIQSSVANVAPWITTIGASTLDRRFPAIVRLSNGEFIYGESMYPGNKFKHATKELEVVYLTGGQMGGELCLKGSLPREQVEGKIVLCDRGVNGRSEKGQIVKESGGAAMILANTEINLEEDLVDVHVLPATLIGFSEANRLKAYMNTTSNPKARIQFGGTVIGRSRAPSVAQFSSRGPSLTNPSTLKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRSNFTVMSGTSMACPHVSGIAALIHSAHPKWTPAAIKSAIMTTAEVTDHYGKPILDGSKPAGVFAMGAGHINPTKAIDPGLVYDIKPYEYVIHLCALGYTHSEIFIITHMNVSCHKVLQMNKGFSLNYPSMSVVFKHKTTSKAVSRRLTNVGSPNSIYSVEVTAPKGVQVRVKPRRLVFKYVNQSLNYKVWFMSEKGKEGRKVSSSEGHLTWVHSENGKYKVRSPIVVTWKN 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9666342 9668654 + CmaCh02G017160.1 Cma02g01716 289467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma02g01716 770 Gene3D Peptidase S8/S53 domain 139 628 IPR036852 GO:0004252|GO:0006508
Cma02g01716 770 ProSiteProfiles Serine proteases, subtilase domain profile. 114 615 - -
Cma02g01716 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 767 IPR045051 -
Cma02g01716 770 Gene3D - 345 485 - -
Cma02g01716 770 SUPERFAMILY Protease propeptides/inhibitors 50 111 - -
Cma02g01716 770 CDD Peptidases_S8_3 109 582 IPR034197 -
Cma02g01716 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 111 IPR037045 -
Cma02g01716 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Cma02g01716 770 Pfam PA domain 399 464 IPR003137 -
Cma02g01716 770 SUPERFAMILY Subtilisin-like 112 619 IPR036852 GO:0004252|GO:0006508
Cma02g01716 770 CDD PA_subtilisin_like 352 478 - -
Cma02g01716 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 26 767 - -
Cma02g01716 770 Pfam Peptidase inhibitor I9 31 111 IPR010259 -
Cma02g01716 770 MobiDBLite consensus disorder prediction 200 226 - -
Cma02g01716 770 Pfam Subtilase family 136 586 IPR000209 GO:0006508|GO:0008236
Cma02g01716 770 Pfam Fibronectin type-III domain 664 766 IPR041469 -
Cma02g01716 770 Gene3D - 632 768 - -
Cma02g01716 770 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Cma02g01716 770 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cma02g01716 770 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g01716 Cma19g00117 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01716 Cma-Chr2:9666342 Cma04g00046 Cma-Chr4:233078 0 dispersed
Cma19g00117 Cma-Chr19:695950 Cma02g01716 Cma-Chr2:9666342 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma02g01716 - - cmax:111490865 1544.64