Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00073 ATGACGATCACACCCAAGATTTCTATCAACGATGGCAACTTGGTGGTTCATGGGAAGACCATACTGACTGGCGTGCCTGACAACATTGTGCTGACTCCAGGATCAGGCCTTGGACTCGTTGCTGGCGCATTCATTGGTGCCACTGCTTCCAACAGTAAAAGTCTGCACGTTTTCCCTGTGGGTGTGTTAGAGGGTCAGCGCTTCCTGTGTTGTTTTCGTTTCACGTTATGGTGGATGACACAGAGAATGGGAACATCTGGGAGAGACATCCCTTTTGAGACACAGTTCCTGCTTATGGAGAGCAAGGGAACCGAAGGGGAGGATCCTGATAATTCATCGACCATCTACACTGTCTTCCTTCCTCTTCTTGAAGGCCAATTCCGTGCTGCCCTGCAGGGCAATGAAAAGAATGAGATGGAGATTTGCCTCGAGAGCGGAGATAATTCTGTTGAGACAAACCAAGGACTTTCTCTTGTCTATATGCATGCTGGGACCAATCCCTTTGAAGTTATCAATCAAGCAGTGAAGGCTGTTGAAAAGCATATGCAAACTTTTCTACATCGAGAGAAGAAAAAGTTACCTTCCTTCCTTGACTGGTTTGGTTGGTGTACTTGGGATGCTTTTTACACCGATGTCACCGCTGAGGGTATTATGGAAGGTCTCGAAAGCCTATCAGAGGGAGGGGCACCTCCAAAATTCTTGATCATAGATGATGGTTGGCAACAGATTGAGAGCAAACCAAAGGATGCTGATTGTGTTGTACAAGAAGGAGCACAGTTTGCGAGTAGGCTTTCAGGAATAAAAGAAAACCACAAGTTTCAGAAAAATGAGAAGAACAATGAGCAGCAAGTCCCAGGCCTGAAGGTGGTTGTTGATGATGCCAAGCAACAGCACAATGTGAAATTTGTGTATGCGTGGCATGCTTTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGGTCCAGGGCTGGAGCACTATGAGTCTGCTTTGGCATACCCAGTCCAGTCACCGGGCATGTTGGGCAACCAACCAGACATAGTTGTAGACAGCCTTGCTGTTCATGGGATTGGCCTTGTTCATCCAAAGAAAGTCTTTAATTTCTATAACGAGCTTCATTCCTACTTGGCTTCATGTGGTATCGATGGTGTAAAGGTTGATGTGCAAAACATTATTGAGACCCTCGGTGCTGGTCATGGTGGTCGAGTTGCGCTTACTCGTAGCTACCATCAGGCCCTCGAAGCATCAATTGCTCGAAACTTTTCCGACAATGGTTGCATTGCCTGTATGTGCCACAACACCGATGGTCTCTACAGTGCCAAACAGACTGCGGTTATGAGAGCTTCTAATGACTATTACCCTCGTGATCCTGCCTCCCACACCATTCATATCTCTTCTGTAGCTTACAATTCTCTTTTCCTTGGAGAGTTCATGCAGCCTGACTGGGATATGTTCCATAGTTTACATCCTACAGCAGAGTATCACGGAGCTGCTCGTGCGATTGGTGGATGTGCAATCTATGTCAGTGACAAACCAGGCAACCACAACTTTGAGTTGTTGAAGAAGCTAGTCCTTCCTGATGGATCAGTTCTTCGTGCACAGTTACCTGGCCGACCGACACATGACTCTATGTTCAACGATCCAGCTAGAGATGGCACCAGCCTGCTCAAAATTTGGAATATGAACAAGTGTTCTGGTGTTGTTGGAGTATTCAACTGCCAGGGTGCTGGTTGGTGCAGGATCACGAAGAAGACTCGCATTCACGACGAGTCTCCAGGTACCCTCACCACCTCTGTCCGTGCAGCCGATGTCGATGCTATTTCCCAAGTTGCCAGTGCCGATTGGAAGGGCGATTCTATCGTTTATGCTTATCGATCAGGAGAATTGACTCGATTGCCAAAAGGTGCCTCGGTTCCAGTGACCCTCAAAGCTCTAGAATATGATCTTTTCCATATTTCTCCTCTAAAGGACATCACCTCAAACATCTCATTTGCACCAATCGGTCTGCTCGACATGTTCAACATCGGCGGTGCCATCGAGCAAGTCGATGTCCAAGTGATCGAACCATTGCTAGAGTTCGACGGTGAAATTGCCTCCGAGCTAACCGGCTCTCTCCCCAATGATCGACCTCCAACAGCCACAATCACCTTGAAAACTCGAGGTTGTGGAAGGTTTGGTGTATACTCATCTCAACGACCTCTAAAATGCAGTGTGGACAAGACAGATACCGACTTTGTGTACGACGAGGCAACGGGATTAGTCACCTTCACCGTCCCTATCCCAACCGAGGAAATGTATAGATGGAGCATTGAAATTCAAGTTTAA 2322 47.37 MTITPKISINDGNLVVHGKTILTGVPDNIVLTPGSGLGLVAGAFIGATASNSKSLHVFPVGVLEGQRFLCCFRFTLWWMTQRMGTSGRDIPFETQFLLMESKGTEGEDPDNSSTIYTVFLPLLEGQFRAALQGNEKNEMEICLESGDNSVETNQGLSLVYMHAGTNPFEVINQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGIMEGLESLSEGGAPPKFLIIDDGWQQIESKPKDADCVVQEGAQFASRLSGIKENHKFQKNEKNNEQQVPGLKVVVDDAKQQHNVKFVYAWHALAGYWGGVKPAGPGLEHYESALAYPVQSPGMLGNQPDIVVDSLAVHGIGLVHPKKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGHGGRVALTRSYHQALEASIARNFSDNGCIACMCHNTDGLYSAKQTAVMRASNDYYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPTAEYHGAARAIGGCAIYVSDKPGNHNFELLKKLVLPDGSVLRAQLPGRPTHDSMFNDPARDGTSLLKIWNMNKCSGVVGVFNCQGAGWCRITKKTRIHDESPGTLTTSVRAADVDAISQVASADWKGDSIVYAYRSGELTRLPKGASVPVTLKALEYDLFHISPLKDITSNISFAPIGLLDMFNIGGAIEQVDVQVIEPLLEFDGEIASELTGSLPNDRPPTATITLKTRGCGRFGVYSSQRPLKCSVDKTDTDFVYDEATGLVTFTVPIPTEEMYRWSIEIQV 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 665926 671454 - CmaCh03G000730.1 Cma03g00073 289644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00073 773 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 773 - -
Cma03g00073 773 Pfam Raffinose synthase or seed imbibition protein Sip1 7 757 IPR008811 -
Cma03g00073 773 Gene3D Aldolase class I 198 517 IPR013785 -
Cma03g00073 773 PANTHER - 1 773 IPR008811 -
Cma03g00073 773 SUPERFAMILY (Trans)glycosidases 196 527 IPR017853 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00073 Cma07g01319 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01049 Cma-Chr1:7758047 Cma03g00073 Cma-Chr3:665926 0 dispersed
Cma03g00073 Cma-Chr3:665926 Cma09g01040 Cma-Chr9:5380242 0 dispersed
Cma03g00073 Cma-Chr3:665926 Cma07g01319 Cma-Chr7:7466028 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00073 K06617 - csv:101211538 1496.49