Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00274 ATGGCGATTAGGGTTAGGCCATTCACCCGAATGGAAGGGTCTAGTATCGACCCCGACTCTCATAGAGCTGCTTCTACCAGTGGTAGTTCAAGAAGGTTTGGATTGTTAGCTGCCTCGAATATTATTCAGGCTCCACTTTCTGCTCTATTAGAGTATTCGGGTCTTCTTCGTGGCCGCCCAAGTCATCAAGAACCTGAGGCATTGATAAGTGCACGACTGCCTTCGGCTTTTCGAGGCCATCTTCGCAGCCAGATTGACGAATCTTCAAGTGCCAGTAATGATGGAGAGGTTTCGATTAGGATAATTGGGGCTGGGGAACCAGAACATGGGAGAGATGGTGCTGGACTAGTAGTTGGGCAAGCGAGGGAATTCAGTGGTCAGAATGCAGCGTCTTCGCAATCTGTGACCTTGGCATCGGAGCTTAGCCAGGGAGATTCTGCTACTGAACGCAGTGCTCGAGAGGGCATTCCTCAATCGATAAATGCAGGCGCTGATGGGGATGCCTCGGAGGCAGCTGGGGGAAATAGCAGGGATTCTTCTTATCAAAGGTATGATATTCAACAGGCTGCTCGGGGGATTGAGCAGATTCTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATATGGATTGCTGCTTTCATGTACAAGTCGAACGATATTTTGCGAAAACAAACAGCGTTAAAGGGGGAGAGAAAAATCTCTGTTTTGGTTGGCATTTCTCTTGCATTCACCATTCATGTTATTGGTGTGTACTGGTGGTATCAAAATGATGGCCTTTTATATCCGTTGATCATGCTTCCTCCTAGAGCAATACCTCCTTTTTGGCATGCTATTTTCATCATCATGGTGAATGACACTTTGGTCCGCCAAGCAGTGATGGTGGTGAAGTGCATTCTATTGATGTATTACAAGAACAGCAGAGGCCGCAATTATCGTAAACAGGGTCAAATGCTAACTTTAGTCGAATATTTACTACTACTGTACCGTGCCTTATTGCCCACTCCTGTCTGGTATCGCTTCTTTTTGAACAAAGAGTACGGGAGTCTATTTTCTTCGCTATTGACGGGACTGTACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCACTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACGTCGGAGCAGCTGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTTCGAGCGGGAACGAACATGTCCATTGTGTAGGGCTTTGGTTAAACCTGCAGATCTCAGGTCATTTGGTGATGGATCAACCAGTCTATTTTTCCAGGTTTTCTAAGCCATTTACTTCCAGCAGCCCATCAGAGGCTTTGTGGTTCATCACATATTTACCTACACAAAATCAAAGACTGCGCGCACAAGAAGAATGTGCTCGGAAACCCGAATTCGGTATCGGATTGTATACGTAA 1548 45.41 MAIRVRPFTRMEGSSIDPDSHRAASTSGSSRRFGLLAASNIIQAPLSALLEYSGLLRGRPSHQEPEALISARLPSAFRGHLRSQIDESSSASNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREFSGQNAASSQSVTLASELSQGDSATERSAREGIPQSINAGADGDASEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDGLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQLVICVLFAKRRCMLLSYSDVNTYFVKIVYQSGSSGNEHVHCVGLWLNLQISGHLVMDQPVYFSRFSKPFTSSSPSEALWFITYLPTQNQRLRAQEECARKPEFGIGLYT 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3712092 3717061 - CmaCh03G002740.1 Cma03g00274 289845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00274 515 MobiDBLite consensus disorder prediction 1 27 - -
Cma03g00274 515 MobiDBLite consensus disorder prediction 127 179 - -
Cma03g00274 515 MobiDBLite consensus disorder prediction 127 155 - -
Cma03g00274 515 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 11 408 IPR044235 GO:0061630|GO:1904294
Cma03g00274 515 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 408 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00274 Cma07g01198 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00274 Cma-Chr3:3712092 Cma04g01053 Cma-Chr4:5440327 1.55E-144 dispersed
Cma03g00274 Cma-Chr3:3712092 Cma07g01198 Cma-Chr7:6577258 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00274 - K22379 csv:101205267 700.279