Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00292 ATGCAGGCTCTTCACCAACCCTTAGCCACACCTCACGATCTTCCTCTCAAGTCCGGCCGCCGGCCACTCCAGCCGAAAAACTCGCTCCCGAATCCTGTACCTGCTGTCGCTAAAGTCATCAAATCCAAGCCGGAACGGATCCAGATCTCGCTCCCTACCGATGCCAACAAGGAGAACCATCCACCGATTCACGCGAAGGCCGCGAGTGTCGAGTCCTGTGATTTGTCTCTGGCGGATGAACTCAATGCGGTTAAGAGGAAACTCGAGAGATTGAGATTGGAACGTGAGCGAACGGAGCAGATGTTGAAAGAAAGAGATATGATCTTGGAGTTGCGAATGAAGGAGTTGTTGCAGAGAAGTAAGGAGCAGAGAGATCTGGAGATGGAGGTCGATAGTTTCGATCCGTTGATTCATGTTTTATCTGTTGTTCGTTTGCTGATTTTGGATGATTTGGATGATTTGGATGATTTGGATCAGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAGGAGCGAGAGAAGATTTTTGCCGATGCGCAGTTTCCTGAATATGAAATCGGCGACGGAGAAGAATCGGTCGGCGAAAACTCCTCGTTGGATTCTTCAGAATTCGTCACAGGGGCCTCTGATCTCTCTGCTTCTCTACTTCCTTTCATCAATTCCGAGACGATAACCCTTCTCTTTCATCCCTTATTGCAGCCCCTGCTGGCTTCATCAGAATCCCCATCTCAAAATCGTGGTTCCTTTGGTTGTCTATGTCGCAGTGCTTCTTTTACCTCTTCCAGTTACGACGATTCTCAGAATGACATTGTGGATGTGAAGGAAAACTGCCAGTTTCCTTTTTCATACCCCACCCAGGATAGAAGACGCCTGGTCAAGTGGGGTGCAATGGAGCTACATAATATTAATGATAACCCTGAAAGCTTTGAACTCTCTAGGGTCCAGGAGAAGTTACATAAGGCACAAAGAAGTCGTCATAAAAGTATACAGTTTGAGGATAATTTACAGCATGACGATAATCCAAGGTTGATATACATCAATGATCCAAGGAGAACTAATGATAAGTATGAGTTCACAGGAAATGAGATAACCACCAGCAAATATACATTGATTACCTTCTTGCCAAAGAATCTCTTTATTCAGTTCCATAGGGTTGCCTATCTTTATTTTCTTGCTATTGCAGCTCTTAACCAGCTTCCACCTTTGGCAGTCTTTGGGAGAACGGTATCTCTTTTTCCCCTCCTGTTTGTGCTATGTGTTACAGCTATTAAAGATGGCTATGAGGATTGGCGTAGACATAGATCTGATCGTAATGAGAACAATAGACAGGCTCTCGTGCTTCAATCTGATGAATTCCGATTGAAAGTGTGGAAAAAAATACGAGCAGGTGAAGTTGTGAAAATCTGTGCAGACGAGGTCATTCCTTGTGACATGGTTTTATTGGGGACAAGTGATCCTAGTGGCCTTGCTTACATACAAACAATGAATTTGGACGGTGAATCAAACTTGAAGACAAGGTATGCTAGGCAGGAAACAGCATTTGCAGTAGCTGAGGGGTGTTCATATTCTGGTCTTATTCGATGTGAACAACCTAATAGGAACATTTATGAGTTCACTGCCAATATGGAGTTCAACAACCATAAATTTCCCCTCAGCCAGTCAAACATAGTCTTGCGTGGTTGTCAGCTGAAGAACACTGAATGGATTATTGGGGTGGTTGTCTATGCCGGACAAGAGACAAAAGCCATGTTAAACAGTGCAATGTCTCCTGCCAAGAGAAGTAAACTGGAGGGTTACATGAACAGGGAAACATTGTGGTTGTCAATCTTCCTCTTTGTCATGTGTCTAGTTGTGGCCCTTGGAATGGGGTTATGGCTTGTTCGGCACAAGGAACAGCTTGATACCTTGCCATATTATAGGAAAAGGTATTTCACAAATGGGGCCGACGATGGTAAGAAGTACAGGTTTTATGGAATACCTATGGAAACCTTTTTCTCCTTTTTGAGTTCTATTATAGTGTTCCAGATTATGATACCGATATCCCTTTATATTACAATGGAGATGGTGAGACTGGGGCAGTCATATTTCATGATTGAAGATAAGCACATGTACTGCAGAAACTCATCCTCAAGGTTTCAGTGTAGATCATTGAATATCAATGAGGATCTTGGTCAAGTTCGCTACGTATTTTCTGATAAAACAGGAACACTTACTGAAAATAAGATGGAATTTAAAAAAGCAAGTGTGTACGGGAAGAATTACGGGAACAACTTGACTGGGGGTTATGCATCAATGTATTCCATTCCAGCAGCTATAGGGGGGAGGAGGAGGAAACTTAAATCTGAAGTTGCTGTTGATACCGAACTTGTCCAATTATTGCACAAGGACCTAAATGGAGACGAAAAGATTGCTGCACATGAATTTTTTCTTACATTGGCTGCATGCAATACTGTAATTCCCATTCTCATGGATGACAAATCTAGTTATGAAAATGGTGAATTGCACGAGGATGTCAAAACTATTGGTTATCAGGGGGAATCCCCTGACGAGCAGGCACTAGTTGCTGCAGCCGCTGCTTATGGATATACCCTTTTTGAGCGCACGTCTGGGCATATTGTTATAGATGTCAATGGTGAGAACTTAAGGTTGGATGTTTTGGGTTTACATGAGTTTGATAGCGTTCGCAAAAGAATGTCTGTTGTCATCAGATTCCCTGACAATACTATAAAGGTGCTGGTAAAAGGTGCCGATACTTCGATGTTGAGTATTTTAGGCAATGACTCTGATAGGGAAGAATTTATCAAGCATGCTACTCGACGCCATTTGAGTGAATATTCAATGGAAGGTTTGCGAACACTTGTAGTTGCTGCCAGAGACTTGGAAGATTCTGAATTTGAGCTGTGGCAGAGCAGATATGAGGATGCTAGCACTTCACTGACTGAAAGAGCAGTAAAACTACGTCAGACAGCAGCCCTTATAGAATGTGATCTAAAGCTTTTGGGTGCAACTGCTATTGAGGACAAGCTTCAAGACGGTGTACCCGAAGCCATTGAATCTCTTCGGCAGGCTGGAATAAAGGTCTGGATTCTGACTGGAGATAAGCAGGAGACAGCCATATCAATCGGTCTCTCCTGCAAATTGCTGACTCCCGATATGCAGTCAATTATTGTCAATGGAAGTTCCGAGTATGATTGCAGGAAACTTTTAGCTGATGCTATAGCAAAATATGGTATTAAATCAACACAAGGCAGAAGTCAAACACAGAAGATGAATTGTGAGAATAAACGCCATGATACACCAAAGACATCCAGTATGTCAGATTTTAATGAAGAGAAAGAAGAAGTGACTGATAAACCACTAGCTCTAATAATTGATGGAAACAGTTTGCTTTTTGAGCTTGCAACTTCATGCAACGTTGTGCTATGCTGTCGTGTCGCTCCTTTGCAGAAAGCTGGAATTGTTGATCTGATTAAGAGTAGAACTGATGATATGACATTGGCAATTGGCGATGGGGCCAACGATGTCTCAATGATTCAGATGGCCGATGTAGGCGTTGGTATATGTGGACAGGAAGGGCGTCAAGCGGTAATGGCATCTGATTTTGCCATGGGACAATTTCGCTTTTTAAAAAGATTACTTCTAGTGCATGGACATTGGAACTATCAACGTGTAGGCTACATGGTTCTATACAACTTCTACCGCAATGCTGTTTTCGTCTTGATGCTCTTCTGGTACATTCTATGCACAGCATTCTCAACAACTTCAGCTTTGACTGATTGGAGTAGTGTGTTTTACTCTGTTATTTATACGTCTATCCCCACTATTTTTGTTGGTATTCTGGACAAAGACCTGAGTCACAAAACCCTACTCCAATATCCTAAGCTCTATGGTGCTGGCCATAGACAGGAGGCATACAATTTGCGGCTCTTTTGGTTCACAATGATTGATACCCTTTGGCAGAGTCTTGTTCTCTTCTATGTGCCATTATTCATTTACAAGGAGAGTTCCATTGATATATGGAGCTTGGGAAGTTTGTGGACCATAGCTGTTGTTATCCTTGTGAATGTTCACTTAGCGATGGATGTTCAACGTTGGGTATATATTACACATGCTGCAGTCTGGGGATCCATAGTCATAACGTACGCATGCATGGTGGTGTTGGATTCGATACCCGTTTTTCCTAATTACTGGTTGGCTTCCTGTACCGAATCTTGGACGATCTTTCATCTGGCTAAGTCCCCAACCTATTGGTTATCTATATTGCTCATAATAGTTGTTGCATTGCTTCCACGCTATCTTTTTAAAGTTGTGCACCAAAGATTCTGGCCCTCGGATATTCAGATAGCCAGAGAAGCCGAGGTACTGAGAAAACGAAAAGGTCGTGAACAGTTTAGTTCAAAGCAAGGTCGAGATTCCAATTAA 4422 42.72 MQALHQPLATPHDLPLKSGRRPLQPKNSLPNPVPAVAKVIKSKPERIQISLPTDANKENHPPIHAKAASVESCDLSLADELNAVKRKLERLRLERERTEQMLKERDMILELRMKELLQRSKEQRDLEMEVDSFDPLIHVLSVVRLLILDDLDDLDDLDQRISPIRSLREKEREKIFADAQFPEYEIGDGEESVGENSSLDSSEFVTGASDLSASLLPFINSETITLLFHPLLQPLLASSESPSQNRGSFGCLCRSASFTSSSYDDSQNDIVDVKENCQFPFSYPTQDRRRLVKWGAMELHNINDNPESFELSRVQEKLHKAQRSRHKSIQFEDNLQHDDNPRLIYINDPRRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRQALVLQSDEFRLKVWKKIRAGEVVKICADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETAFAVAEGCSYSGLIRCEQPNRNIYEFTANMEFNNHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAMSPAKRSKLEGYMNRETLWLSIFLFVMCLVVALGMGLWLVRHKEQLDTLPYYRKRYFTNGADDGKKYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEMVRLGQSYFMIEDKHMYCRNSSSRFQCRSLNINEDLGQVRYVFSDKTGTLTENKMEFKKASVYGKNYGNNLTGGYASMYSIPAAIGGRRRKLKSEVAVDTELVQLLHKDLNGDEKIAAHEFFLTLAACNTVIPILMDDKSSYENGELHEDVKTIGYQGESPDEQALVAAAAAYGYTLFERTSGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTIKVLVKGADTSMLSILGNDSDREEFIKHATRRHLSEYSMEGLRTLVVAARDLEDSEFELWQSRYEDASTSLTERAVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTPDMQSIIVNGSSEYDCRKLLADAIAKYGIKSTQGRSQTQKMNCENKRHDTPKTSSMSDFNEEKEEVTDKPLALIIDGNSLLFELATSCNVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKDLSHKTLLQYPKLYGAGHRQEAYNLRLFWFTMIDTLWQSLVLFYVPLFIYKESSIDIWSLGSLWTIAVVILVNVHLAMDVQRWVYITHAAVWGSIVITYACMVVLDSIPVFPNYWLASCTESWTIFHLAKSPTYWLSILLIIVVALLPRYLFKVVHQRFWPSDIQIAREAEVLRKRKGREQFSSKQGRDSN 1473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3818198 3827817 + CmaCh03G002920.1 Cma03g00292 289863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00292 1473 Coils Coil 81 101 - -
Cma03g00292 1473 SUPERFAMILY Calcium ATPase, transduction domain A 441 583 IPR008250 -
Cma03g00292 1473 SUPERFAMILY HAD-like 717 1213 IPR036412 -
Cma03g00292 1473 MobiDBLite consensus disorder prediction 1086 1110 - -
Cma03g00292 1473 Pfam haloacid dehalogenase-like hydrolase 727 1041 - -
Cma03g00292 1473 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 663 753 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma03g00292 1473 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1138 1254 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma03g00292 1473 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 736 1013 IPR023299 GO:0000166
Cma03g00292 1473 Pfam Phospholipid-translocating P-type ATPase C-terminal 1196 1444 IPR032630 -
Cma03g00292 1473 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 332 1468 - -
Cma03g00292 1473 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 358 1451 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cma03g00292 1473 Pfam E1-E2 ATPase 441 688 - -
Cma03g00292 1473 MobiDBLite consensus disorder prediction 1090 1110 - -
Cma03g00292 1473 ProSitePatterns E1-E2 ATPases phosphorylation site. 732 738 IPR018303 -
Cma03g00292 1473 Gene3D - 997 1208 IPR023214 -
Cma03g00292 1473 SFLD p-type atpase 714 1219 IPR044492 -
Cma03g00292 1473 Gene3D - 420 587 - -
Cma03g00292 1473 Gene3D - 841 980 IPR023299 GO:0000166
Cma03g00292 1473 Pfam Phospholipid-translocating ATPase N-terminal 344 409 IPR032631 -
Cma03g00292 1473 MobiDBLite consensus disorder prediction 1 32 - -
Cma03g00292 1473 SUPERFAMILY Calcium ATPase, transmembrane domain M 358 1443 IPR023298 -
Cma03g00292 1473 CDD P-type_ATPase_APLT_Dnf-like 360 1328 - -
Cma03g00292 1473 SFLD C1.7: P-type atpase like 714 1219 - -
Cma03g00292 1473 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 332 1468 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00292 Cma07g01220 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00292 Cma-Chr3:3818198 Cma04g02499 Cma-Chr4:17118124 0 dispersed
Cma07g01220 Cma-Chr7:6700783 Cma03g00292 Cma-Chr3:3818198 0 transposed
Cma03g00292 Cma-Chr3:3818198 Cma07g01219 Cma-Chr7:6696877 3.07E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00292 K14802 - csv:101206692 2222.2