Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00322 ATGGAAGACGAATCGTTGCAGAAGGTTGCGATTTCAGGGCCAATCTTAGCCTCTTTGATCCAACGCTGCTCCTCCTCCTCCTCCGGCGCCGTTGATGGTCTTCTCTTCGGCCATGTCTCCGAAACTACGCCCTTATCCCTCTCCGATGATTCATCTTCTTCATCCAACATCGAACCATCGGTACGTGTCGCCACTGTCACCGGATTTCTCTGCTCTGGTACCACCAATAGCTTTTACGATTCTTCTGGACAAGTAGATTCACAATTGCTTAACCGCCTTCTCGGCCGAAACCTGTCCGACGGCCAAGCTCAACCTAACGATTCTTTGGTCGGTTGGTTTTCCGGCCGCCGGAGAACTCAGCTTCGACCTTCCATGCGTGAATACTTAGTGAGTTCCTCTCTGTCTTCGATGAAGCAATTGTCGTTTCCTGTCAAAGACTCTGTGAAACCTACCAATCTAATCCCTAGTTTGTTTCTGCTTCTGACTTCGCCGATATCTGATCAAATTATCCACACACACGAGTACCGTGCTTTTCAATTTCGGTCCTCCAATCAGTTCTTTGAGCCGAAATCAATTGACATTGTGAACATCGGACCGGCATTTCGTGGCCACTATGGATCGTTTACCCCTAATTCTCCTTTCCCTCATTTTCCTTGCGAGATGAGAGCCTCTCCGATGAATGTAGATAAGATTGATGGGAATTTGAATGTGATGAAGCAAAACTTGAAAGATCAGAAGCAACTGAATATGTGTGCTGAAGGATTCGAGATTGGGAACTTGACCCGGTTACTGGGTTCTGAGGCTGCAAATTATACTGCTGGGCTGGAGGATTTATACGAAAAAATGCTTGCCAAGACTGAGAGCTTGGCACGGCTCGTTGAGAAGAGCTCTGCTCAGGTTCTTGATCAGGAAAATCACAACAGAAAGTTGAGATATAAACTTGCGAGGTACCCTGGATTTGAGTAA 966 46.89 MEDESLQKVAISGPILASLIQRCSSSSSGAVDGLLFGHVSETTPLSLSDDSSSSSNIEPSVRVATVTGFLCSGTTNSFYDSSGQVDSQLLNRLLGRNLSDGQAQPNDSLVGWFSGRRRTQLRPSMREYLVSSSLSSMKQLSFPVKDSVKPTNLIPSLFLLLTSPISDQIIHTHEYRAFQFRSSNQFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHFPCEMRASPMNVDKIDGNLNVMKQNLKDQKQLNMCAEGFEIGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVEKSSAQVLDQENHNRKLRYKLARYPGFE 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4037976 4039151 + CmaCh03G003220.1 Cma03g00322 289893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00322 321 PRINTS Plant protein family FAM175 signature 1 22 IPR023241 -
Cma03g00322 321 PRINTS Plant protein family FAM175 signature 47 71 IPR023241 -
Cma03g00322 321 PRINTS Plant protein family FAM175 signature 162 182 IPR023241 -
Cma03g00322 321 PRINTS Plant protein family FAM175 signature 199 219 IPR023241 -
Cma03g00322 321 PRINTS Plant protein family FAM175 signature 227 247 IPR023241 -
Cma03g00322 321 PRINTS Plant protein family FAM175 signature 253 273 IPR023241 -
Cma03g00322 321 PRINTS Plant protein family FAM175 signature 276 302 IPR023241 -
Cma03g00322 321 PRINTS Protein family FAM175 signature 11 29 IPR023238 -
Cma03g00322 321 PRINTS Protein family FAM175 signature 77 96 IPR023238 -
Cma03g00322 321 PRINTS Protein family FAM175 signature 111 127 IPR023238 -
Cma03g00322 321 PRINTS Protein family FAM175 signature 191 205 IPR023238 -
Cma03g00322 321 PANTHER ABRAXAS FAMILY MEMBER 1 315 IPR023238 -
Cma03g00322 321 PANTHER OS07G0540200 PROTEIN 1 315 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00322 Cma14g00042 CCT
Cma03g00322 Cma06g00213 CCT
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00322 K20799 - csv:101208097 534.643