Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00346 ATGGAGAATTGTGATCGCCGTGCTTTTCTTCACCGGCGGACGAATCGAATCGGCGTCAATGCGGAGGCAGCAGCGGCGGCGGCGGCGGAGGATAGGTTTCCGGCGTGGAGCGTACCGGAGACGAAGGAACTGCTTGCGATAAGAGCGGCGCTGGATAGAAGGTTCTCGGAAATGAAACAGAATAGGATGCTTTGGATTTCGGTCGCCGGTAATATGAAGGCGAAAGGCTTTAATCGGAACGACGAGCAGTGCAAGTGCAAGTGGAAAAATCTCGTCACGCGCTATAAGGGGTGTGAAACTATGGATCCTAAAGCTCGAAAGCAACCATTTCCATTTTACGACGACCTCCACACCATTTTCACTGCAAGGATGCAAAAGAATTGGTGGATCGAACCCAAAAACCGAGCAAAAGACTCGAAAAGGAAAGCCACGACCGAGCGATTGTCTAGCGAGGACATGAACGAAGAAGAAGCAAAAAGGGGAAAAAGGAGGAGAGAAGAAGATGAGAGGAGCAATTTGAAGGAAATAATGAAGGGGTTTGTGGAAAGAGAGAAGGAAATGGAGAGGCAATGGAGAGAAGCGTTTAGGGTTAGAGAGGAAGAGAGAAGGTTGAAGGAGAAGGAATGGAGGATGAAAATGGAAGGTCTAGAGAGGGAGAAGATGATGACGTGGATAATGTGGAGAGAGAAAGAAGATGAGAGGAGAGAGAGAGAGGAAGCAAGGGCTTTGAACACTCATGCTTTCATCTCTGCTTTGCTGAGGAGCTTCACATAA 774 48.58 MENCDRRAFLHRRTNRIGVNAEAAAAAAAEDRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGNMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKARKQPFPFYDDLHTIFTARMQKNWWIEPKNRAKDSKRKATTERLSSEDMNEEEAKRGKRRREEDERSNLKEIMKGFVEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKEDERREREEARALNTHAFISALLRSFT 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4145982 4147990 - CmaCh03G003460.1 Cma03g00346 289917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00346 257 Gene3D - 36 97 - -
Cma03g00346 257 PANTHER - 9 256 - -
Cma03g00346 257 MobiDBLite consensus disorder prediction 134 170 - -
Cma03g00346 257 Pfam Myb/SANT-like DNA-binding domain 35 118 IPR044822 -
Cma03g00346 257 CDD GT1 36 99 - -
Cma03g00346 257 ProSiteProfiles Myb-like domain profile. 36 92 IPR001005 -
Cma03g00346 257 PANTHER - 9 256 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00346 Cma06g00225 CCT
Cma03g00346 Cma14g00061 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00346 Cma-Chr3:4145982 Cma04g00583 Cma-Chr4:2963403 3.26E-28 dispersed
Cma14g00061 Cma-Chr14:265014 Cma03g00346 Cma-Chr3:4145982 1.44E-50 wgd
Cma03g00346 Cma-Chr3:4145982 Cma06g00225 Cma-Chr6:1153663 6.72E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
34603 PF13837 Myb_DNA-bind_4 1.30E-17 CL0123 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00346 - - csv:101218250 311.227