Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00360 ATGCGTTCATCCAATAATCCAACGGATATAAAACCACGCAACAGATTATGTGGCTCTTGCCGATCACAAGCCCCCTCTCTCAGCCACATAACAACCCAACCAGAATCCCAAATCCCATCTCACACTCTTCAATTCCCCTCTCAACTCATCGTCGCAATGGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGTTGACGTGCGGCCGAGTTCCGGCCGAGTCCAAGCCCGATTCGGATTCGGTAAGAAAAAAGCTCCGGCAAAGAAATCGCCATCGTCGAAGACGATATCCGACCGTCCACTGTGGTTTCCGGGAGCCAAGGCCCCGGAATGGCTGGACGGAAGCTTGGTTGGCGACTACGGATTCGATCCGTTCGGGCTGGGGAAACCGGCAGAGTATTTGCAGTACGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATAATCGGGACGAGATTTGAGAACGCGGACGTGAAATCGACGCCGTTTCAGCCGTACTCGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTGATCCATGGAAGATGGGCGATGTTGGCCACACTCGGCGCTCTCGCCGTTGAAGGCCTCACTGGTATCACTTGGCAAGACGCCGGAAAGGTAGAATTAGTGGAAGGTTCGTCGTACCTTGGGCAGCCGCTGCCCTTCTCCCTGACCACGCTGATCTGGATCGAGGTTCTGGTGATCGGATACATCGAGTTTCAAAGGAACGCCGAGCTGGACCCGGAGAAGAGGCTGTACCCGGGAGGCAAGTTCTTCGACCCCTTGGGCCTAGCCGAGGATCCCGAGAAGAAAGCGGTCCTACAATTGGCGGAGATCAAGCACGCTCGCCTAGCCATGGTTGCCTTCCTAGGCTTCGCGGTTCAGGCTGCTGTCACTGGCAAAGGCCCCCTCAACAACTGGGCCACCCACCTCAGCGACCCACTCCACACCACCATCATTGACAACTTCTCCTCTTGA 1017 56.24 MRSSNNPTDIKPRNRLCGSCRSQAPSLSHITTQPESQIPSHTLQFPSQLIVAMATATAAATSSFIGTRLVDVRPSSGRVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4245551 4247657 - CmaCh03G003600.1 Cma03g00360 289931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00360 338 MobiDBLite consensus disorder prediction 19 37 - -
Cma03g00360 338 MobiDBLite consensus disorder prediction 1 37 - -
Cma03g00360 338 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 54 338 - -
Cma03g00360 338 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 338 IPR001344 GO:0009765|GO:0016020
Cma03g00360 338 Pfam Chlorophyll A-B binding protein 113 309 IPR022796 -
Cma03g00360 338 Gene3D Chlorophyll a/b binding protein domain 107 338 - -
Cma03g00360 338 SUPERFAMILY Chlorophyll a-b binding protein 98 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00360 Cma-Chr3:4245551 Cma04g02584 Cma-Chr4:17715041 6.09E-48 dispersed
Cma03g00360 Cma-Chr3:4245551 Cma07g01046 Cma-Chr7:5522385 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00360 K08915 - csv:101208740 531.561