Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00383 ATGGCGGAAGAGTTGCAGGTCTTCGGTTTCTGGGCAAGCCCCTTCAGCCGCAGAGTGGAGCTTGCTCTGAAGCTCAAAGGCGTCGAATACCAACACGTCGAGGAAGATTTGCCCCACAACAAGAGCCATTTGCTCCTCCAATACAACCCAATTCACAAGAAGGTTCCTGTCCTCGTCCACCATGGAAAACCCATTTCTGAGTCTCTTGTGATCCTCGAATACATCGATGAAATCTGGAAAAACAACCCCCTGTTGCCCCAAAATCCGTACGAACGAGCTCTGGCTAGGTTTTGGGCTAAGTATATTGAGGACAAGGTTGTGGCTGCGATGCTGAAGGCTGGGAAAGCCAAAATTGAAGACAGGGAAAAGGGCTTCGAGGAAGCAGGGGAGGCGTTGGAACCGCTTGAGAAGGAGCTTGGAAGCAAGAGGTTCTTCGGGGGAGAGAAGATTGGGTTTGTGGATGTTGTTGGCATTGTGGTAGCTTACTGGGTTCCTGCCATTGATGAAGCTGTTGGGATTCAGATGCTGGGAAGTAACAGGTTTCCGAATGTGAAGCAATGGAGTGAAGAGGTTGTGAATCATGGCGTGGTGAAACAGATTCTGCCGCCAAAAGATAAGCTCGTGGCTTATTTGCGAACTGTTCTAAGCAGTAACTAG 657 49.62 MAEELQVFGFWASPFSRRVELALKLKGVEYQHVEEDLPHNKSHLLLQYNPIHKKVPVLVHHGKPISESLVILEYIDEIWKNNPLLPQNPYERALARFWAKYIEDKVVAAMLKAGKAKIEDREKGFEEAGEALEPLEKELGSKRFFGGEKIGFVDVVGIVVAYWVPAIDEAVGIQMLGSNRFPNVKQWSEEVVNHGVVKQILPPKDKLVAYLRTVLSSN 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4364137 4365244 + CmaCh03G003830.1 Cma03g00383 289954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00383 218 Pfam Glutathione S-transferase, C-terminal domain 101 193 IPR004046 -
Cma03g00383 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 214 IPR045073 -
Cma03g00383 218 Gene3D - 85 217 - -
Cma03g00383 218 SFLD Main.3: Omega- and Tau-like 2 213 IPR045073 -
Cma03g00383 218 SFLD Glutathione Transferase (cytosolic) 2 213 IPR040079 -
Cma03g00383 218 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 3 214 - -
Cma03g00383 218 Gene3D Glutaredoxin 1 84 - -
Cma03g00383 218 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cma03g00383 218 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Cma03g00383 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Cma03g00383 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Cma03g00383 218 CDD GST_N_Tau 5 79 - -
Cma03g00383 218 SUPERFAMILY GST C-terminal domain-like 77 214 IPR036282 -
Cma03g00383 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00383 Cma-Chr3:4364137 Cma07g01029 Cma-Chr7:5368867 8.61E-94 dispersed
Cma14g01862 Cma-Chr14:13214607 Cma03g00383 Cma-Chr3:4364137 9.03E-62 dispersed
Cma16g00465 Cma-Chr16:2333498 Cma03g00383 Cma-Chr3:4364137 7.66E-53 dispersed
Cma03g00383 Cma-Chr3:4364137 Cma03g00384 Cma-Chr3:4366133 6.21E-107 tandem
Cma11g00299 Cma-Chr11:1483599 Cma03g00383 Cma-Chr3:4364137 6.20E-65 transposed
Cma03g00383 Cma-Chr3:4364137 Cma07g01028 Cma-Chr7:5365494 1.45E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00383 K00799 - csv:105435246 300.056