Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma03g00415 | ATGGCATCCTCTGTTTTGTTCATCACAATTTTCTCTGCTCTAATTTTTCTGTCCACCCAAACGCTGTCTCAGCACACCCAACTGTTCTATCCTGGATTCAATGCATCCACCAACTTGACTTTGAAGCAATATGCAGGAATCGAGAACAATGGAGTTTTGAGACTCACCAATTATTCCCCTGATATCATCGGCCAGGCCTTTTACGCCACTCCAATTCAGTTCAAAAACTCCTCCACCGCCGCACACGGTGGTAGTAGCAACGGCAAAGTTTTTTCTTTCTCCACCTGTTTTGCCTTCTGCATCATCCCTGAGGACGATAACTATGTCGGCCATGGCTTCACTTTCGCCATCGTACCTTCTAAAAATCTTAGTGCTCTTTCACAGACGTATCTCGGCCTCTTCAACAGAAAACCCTCAACCCATATCTTTGCGGTTGAATTCGATACCATCCAGACTGTTGAGGTTAAAGACATCGACAATAATCATGTGGGTATCGATTTAAATAGCTTGATTTCCAATGTCTCTAAACATGCTGCTTATTTTGATGATTCTGGTCAGCTTTATAATCTGACTCTCAAAAGTGGGAAGCCTGTTAAAGCTTGGATTGATTATGATTCTCGTGAATTCACTCTCAATGTTACGATTTCCCCTTTTTATTCAAAACCCAGAAAGCCACTTCTGTCGTACAGAGTGGATCTTTCGTCAATTTTTAATGAAAATATGTACATTGGATTTACTGCTTCAACGGGTATACTGGCTCATAGCTCGCATTATATTTTGGGGTGGAGTTTCGCCATTAATGGCAAAGCTCGAGATCTTGAGCTCTCTTCGCTTCCATTACCCAAACAGAGGAAAACAGGGGCGAAAATCAGTCTCTCTGTTTATTTGTCTGTAACAGCGGCGAGTTTTTTTGCGATCTCTGTTTTCGCTTTTGGTATTCATTTCTTAAGGAAGCATAAGAAATCTAATGAAATCGAGCTGTGGGAGCTTCAAATGGGACCCCATCGTTATTCCTACAGAGAACTCAAAAAGGGTACTAGAAATTTCAGCGAGAAGGAGATTCTTGGGTTTGGTGGATCTGGGAAAGTATACAGAGGAACCCTTCCGATTTCGAAAACAGAAATCGCGGTGAAGCGAATTTTTCATAATTCGAAACAGGGTCTCCGGGAATTTGTGACGGAAATCGCTACAATCGGAAGGCTCCGTCACCGGAATCTGGTTCAGTTGCTCGGGTGGTGTCGGCGGGGGCAGGATCTGCTTATTGTTTACGAATATATGGCGAATGGGAGCTTGGATAACTATCTATTCGACGATCCGAAAACAATTCTGAATTGGGAACAGAGATCCAAAGTCATTAAAGGGGTTGCCTCTGCTCTGCTTTATCTTCACGAAGGGTACAAACAGGTGGTGATACACAGAGACGTGAAGGCGAGCAATGTGTTGTTAGACGGCGAATTGAACGGGAGATTGGGGGATTTCGGGCTTGCGAAGGTGTACGATCATGGGTCTGTTCCGGTTACGACTCGAGTCGTCGGAACTTTGGGTTATTTGGCACCGGAGCTGCCAAGAACAGGGAAATCAACGACGAGCTCCGACGTATACGCGTTTGGGGCTCTGATGTTGGAAGTAGTTTGTGGGCGGCGGCCAGTGGAGGTGAAGGCGTTGCCAGAGGAGATGACGTTAGTGGATTGGGTTTGGGACAAATACAGAGAAGGGCGGCTTTTGGCCGTCGTCGATCCGAAGCTCCGGGGAGACTACGACGAGGTTGAGGCGGCAATGGTATTAAAATTGGGGGTTATGTGTTCGAATAATGAACCGAAGCAACGGCCGAGTATGAGGCAGATTGTGCAGTGTTTGAACGGAGAAATTGGCGTCGCCGACGAGTGGAAGGCGCCCGACGGGGGGAGCAACGGTGGGGCGGTGGGGGATTTTGTCGTGTCTTTTACGTCTTTATCCATTACCTGA | 1965 | 46.26 | MASSVLFITIFSALIFLSTQTLSQHTQLFYPGFNASTNLTLKQYAGIENNGVLRLTNYSPDIIGQAFYATPIQFKNSSTAAHGGSSNGKVFSFSTCFAFCIIPEDDNYVGHGFTFAIVPSKNLSALSQTYLGLFNRKPSTHIFAVEFDTIQTVEVKDIDNNHVGIDLNSLISNVSKHAAYFDDSGQLYNLTLKSGKPVKAWIDYDSREFTLNVTISPFYSKPRKPLLSYRVDLSSIFNENMYIGFTASTGILAHSSHYILGWSFAINGKARDLELSSLPLPKQRKTGAKISLSVYLSVTAASFFAISVFAFGIHFLRKHKKSNEIELWELQMGPHRYSYRELKKGTRNFSEKEILGFGGSGKVYRGTLPISKTEIAVKRIFHNSKQGLREFVTEIATIGRLRHRNLVQLLGWCRRGQDLLIVYEYMANGSLDNYLFDDPKTILNWEQRSKVIKGVASALLYLHEGYKQVVIHRDVKASNVLLDGELNGRLGDFGLAKVYDHGSVPVTTRVVGTLGYLAPELPRTGKSTTSSDVYAFGALMLEVVCGRRPVEVKALPEEMTLVDWVWDKYREGRLLAVVDPKLRGDYDEVEAAMVLKLGVMCSNNEPKQRPSMRQIVQCLNGEIGVADEWKAPDGGSNGGAVGDFVVSFTSLSIT | 654 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4475133 | 4477097 | - | CmaCh03G004150.1 | Cma03g00415 | 289986 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma03g00415 | 654 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 24 | 281 | IPR013320 | - | |
Cma03g00415 | 654 | SUPERFAMILY | Protein kinase-like (PK-like) | 323 | 619 | IPR011009 | - | |
Cma03g00415 | 654 | CDD | STKc_IRAK | 355 | 621 | - | - | |
Cma03g00415 | 654 | PANTHER | - | 10 | 631 | - | - | |
Cma03g00415 | 654 | Pfam | Protein kinase domain | 349 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma03g00415 | 654 | PANTHER | L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 | 10 | 631 | - | - | |
Cma03g00415 | 654 | Gene3D | - | 25 | 274 | - | - | |
Cma03g00415 | 654 | SMART | serkin_6 | 349 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma03g00415 | 654 | ProSitePatterns | Protein kinases ATP-binding region signature. | 355 | 378 | IPR017441 | GO:0005524 | |
Cma03g00415 | 654 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 470 | 482 | IPR008271 | GO:0004672|GO:0006468 | |
Cma03g00415 | 654 | Pfam | Legume lectin domain | 27 | 278 | IPR001220 | GO:0030246 | |
Cma03g00415 | 654 | Gene3D | Transferase(Phosphotransferase) domain 1 | 426 | 630 | - | - | |
Cma03g00415 | 654 | CDD | lectin_legume_LecRK_Arcelin_ConA | 26 | 268 | IPR001220 | GO:0030246 | |
Cma03g00415 | 654 | ProSiteProfiles | Protein kinase domain profile. | 349 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma03g00415 | 654 | Gene3D | Phosphorylase Kinase; domain 1 | 334 | 425 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma03g00415 | Cma14g00127 | CCT | |
Cma03g00415 | Cma07g01005 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g00415 | Cma-Chr3:4475133 | Cma14g00127 | Cma-Chr14:535702 | 0 | dispersed | |
Cma10g00096 | Cma-Chr10:388019 | Cma03g00415 | Cma-Chr3:4475133 | 1.14E-175 | transposed | |
Cma14g00124 | Cma-Chr14:532341 | Cma03g00415 | Cma-Chr3:4475133 | 0 | wgd | |
Cma03g00415 | Cma-Chr3:4475133 | Cma06g00283 | Cma-Chr6:1371766 | 2.68E-40 | wgd | |
Cma03g00415 | Cma-Chr3:4475133 | Cma07g01005 | Cma-Chr7:5205608 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68405 | PF00069 | Pkinase | 4.10E-45 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma03g00415 | - | - | bhj:120073983 | 1026.93 |