Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma03g00529 ATGGACTTACTGGATGCCGTCGTTCTTCTCCTGGCCTTCCTTTTTTTCTCCTTATGGTGGCGTTACTGGTCCGCTACCGGGGGTGGCTCCAAGAATCTCCCTCCTGGGCCACCGGGCTGGCCGATTGTCGGAAATCTCATACAAGTCATCCTCCAACGTCGTCCCTTCATTTTCGTGGCTCGCGATTTACGTGAAAAATATGGTCCCATTTTCACAATGCAAATGGGGCAACGCACACTCATCATTGTGTCTAGTGCGGAGTTGATTCACGAAGCTCTCGTGCAGCGTGGTCCCTTATTTGCCAGCCGTCCTGCTGACTCACCTATTCGCCTAGTCTTCAGCGTTGGAAAATGCGCTGTCAACTCAGCCGAGTACGGTCCCCTGTGGCGAACACTCCGCCGTAACTTCGTGACGGAGCTGATAAACCCGGCGAGAATCAAGCAATGCAGCTGGATACGGAAGTGGGCCATAAAAAGCCATTTGGAAAGACTGAGGAAAGAGAATTCGGAGAAGGGATTCGTGGAGGTGATGAGCAACTGCCGGCTGTCGGTATGCAGCATTCTGATCTGCATATGCTTTGGAGCGAAAATCCCGGAAGAGGAGATTAAGGTGATAGAGAGCATATTGAAGGACGTGATGTTGATTACGTTGCCGAAGCTCCCTGACTTTTTGCCGGTGCTTACACCTTTGTTCCGACGGCAACTGAAGCAGGCGAAGGAGCTGAGGAGAAAACAGTTGGAATGTCTGATACCGTTGATAAGGAGGAGAAGGTTGTTCGTGGAGAGGAATGGGGATGAGAGCGTGATGAAGGATTTGCCGGAGATGGTTAGTCCAATTGGAGCTGCGTATCTTGATTCGCTATTTGAACTGGAAACGCCTGGACGTGGGCGGTTGGGGGAGGAGGAGCTGGTCACACTTTGTTCGGAGGTAATTAATGCCGGAACTGACACCAGCGCCACGGCGTTGGAGTGGGCTTTGCTTCATTTGGTTCAAGACCAACACATTCAGGAAAGACTATACAACGAAATCATTAGCGTTGTGGCAGGTAAAGATGGTGTGGTAACCGAAGGCGACGTAGAGAAAATGCCATATCTAGGGGCAGTAGTGAAAGAGACATTCCGGCGACACCCTCCCAGCCATTTCTTACTATCTCACGCGGCGACGAAAGAGACGGAGCTCGGCGGGTACACGATCCCGGCGGACGCCAGCGTGGAGTTTTACACGGCTCATTTATCGGACGACCCCAACACGTGGGAAGAACCGGGTTCGTTTCGGCCGGATAGGTTCTTGGAGGGCGACGGTGTTGGCGTGGACGTAACAGGAACTAAGGGCGTCAAGATGGTGCCGTTCGGGGCAGGTCGGCGGATCTGCCCGGCCATGACATTGGGGACGTTGCATGTTCACATGATGCTGGCAAGAATGGTACAGGCATTCAAGTGGGTCCCGGCTCCTGGAGCCCCCCCGGACCCGACCGAGACTTTTGCGTTTACGGTGATTATGAAGAACCCTCTGAAGGCTACCATATTGGAGAGGTCGGGTTAA 1542 53.11 MDLLDAVVLLLAFLFFSLWWRYWSATGGGSKNLPPGPPGWPIVGNLIQVILQRRPFIFVARDLREKYGPIFTMQMGQRTLIIVSSAELIHEALVQRGPLFASRPADSPIRLVFSVGKCAVNSAEYGPLWRTLRRNFVTELINPARIKQCSWIRKWAIKSHLERLRKENSEKGFVEVMSNCRLSVCSILICICFGAKIPEEEIKVIESILKDVMLITLPKLPDFLPVLTPLFRRQLKQAKELRRKQLECLIPLIRRRRLFVERNGDESVMKDLPEMVSPIGAAYLDSLFELETPGRGRLGEEELVTLCSEVINAGTDTSATALEWALLHLVQDQHIQERLYNEIISVVAGKDGVVTEGDVEKMPYLGAVVKETFRRHPPSHFLLSHAATKETELGGYTIPADASVEFYTAHLSDDPNTWEEPGSFRPDRFLEGDGVGVDVTGTKGVKMVPFGAGRRICPAMTLGTLHVHMMLARMVQAFKWVPAPGAPPDPTETFAFTVIMKNPLKATILERSG 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5036277 5038526 + CmaCh03G005290.1 Cma03g00529 290100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma03g00529 513 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 Gene3D Cytochrome P450 29 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 510 - -
Cma03g00529 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Cma03g00529 513 PANTHER CYTOCHROME P450 LIKE PROTEIN 4 510 - -
Cma03g00529 513 SUPERFAMILY Cytochrome P450 34 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma03g00529 513 Pfam Cytochrome P450 34 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00529 Cma-Chr3:5036277 Cma04g01419 Cma-Chr4:7255537 2.36E-145 dispersed
Cma03g00529 Cma-Chr3:5036277 Cma15g00480 Cma-Chr15:2150183 1.31E-164 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma03g00529 K21995 - csv:101216852 957.977